PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM5G869984_P02
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family G2-like
Protein Properties Length: 476aa    MW: 52352.9 Da    PI: 5.2038
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM5G869984_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like38.72.3e-122212492755
            G2-like  27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        A Pk+il++m+v+gLt+++vkSH QkY+l
  GRMZM5G869984_P02 221 AKPKAILDIMNVEGLTRDQVKSHFQKYKL 249
                        88*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.97E-6219252IPR009057Homeodomain-like
TIGRFAMsTIGR015575.3E-10221250IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.603.1E-12221253IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    Send to blast
MRESEELDIE IAKPAGSLVE EMDVGRSVCS PAVEIEGFAE RVGSSTIAPS PCIPSHDMNL  60
QSLPVATGAP YPASMAPSSS AFSTVTTHGC FPYSTPSTAH PSLSGILPCN NNMISYSVLP  120
EEPSGGIFSG QSPEGCADPG DIDYRVESQQ IPGPGRTVDE SDNRDEWFVP TDITWNWHQM  180
AESAPVPSYP NSKSWQHDEQ HMNFGTVSLS PYKVLLAFYC AKPKAILDIM NVEGLTRDQV  240
KSHFQKYKLQ VKQHPSEVPG TSVEMTMRSE AIPSDVQKFV TTRKNKAFAN YHLCHHRHFY  300
KKSLIFLCNQ PGVHLTRHIQ DYALQVQVEF QKKLHDMVES TMLETSRSSE QGRALQRDGD  360
DDAVSEPEPI GGRYVPVLGH GDREDLVRGG DRGGHEDLAP MLVYDDGRDD HDGLAPVLVH  420
GGRGDHDDLP PVHHRGHEHD ENPTAAPPGR DDHGGGDEGS ERRQEHRPAP DARSAP
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.169890.0embryo| ovary| pedicel
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM5G869984
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM5G869984_P02
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9738930.0EU973893.1 Zea mays clone 423794 skin secretory protein xP2 precursor, mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008669170.11e-154protein PHOSPHATE STARVATION RESPONSE 2 isoform X1
TrEMBLA0A1D6E6431e-159A0A1D6E643_MAIZE; Myb family transcription factor
STRINGGRMZM5G869984_P020.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16835911
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.15e-08G2-like family protein