PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G703514_P04
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family AP2
Protein Properties Length: 450aa    MW: 48915.4 Da    PI: 10.2653
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G703514_P04genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.91.9e-113584155
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       ++y+GV +++ rgr+vA+ +d   ++   + +l +f+taeeA ++++   ++l+g
  GRMZM2G703514_P04 35 PRYRGVLRRR-RGRYVARTYD---RK-GNQMWLCTFDTAEEASRRYDSETRRLHG 84
                       68****8666.8******666...32.59******************99888887 PP
2AP239.81.1e-12206255155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        ++ykGV +++ rgr++++ +d   ++  kr +l +f+taeeAa++++   ++l+g
  GRMZM2G703514_P04 206 PRYKGVLRRR-RGRYAVRTCD---RK-GKRMWLSTFDTAEEAARRYDSETRRLRG 255
                        68****8666.8****99444...32.5*******************98888887 PP
3AP234.35.7e-11366415155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        ++y+GV +++ rgr+vA+ rd      + kr  lg+f+ta eAa++++   ++l+g
  GRMZM2G703514_P04 366 PRYRGVLRRR-RGRYVARTRDR-----KgKRMCLGTFDTAGEAARRYDSETRRLRG 415
                        68****8666.8******9993.....34*******************99888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-63577IPR001471AP2/ERF domain
PROSITE profilePS5103216.1473692IPR001471AP2/ERF domain
SMARTSM003806.1E-173698IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-133693IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.3E-173693IPR001471AP2/ERF domain
PfamPF008471.3E-8206248IPR001471AP2/ERF domain
CDDcd000181.12E-12206265No hitNo description
SMARTSM003807.5E-17207269IPR001471AP2/ERF domain
SuperFamilySSF541715.23E-13207264IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.7E-18207264IPR001471AP2/ERF domain
PROSITE profilePS5103216.937207263IPR001471AP2/ERF domain
PRINTSPR003678.0E-5208219IPR001471AP2/ERF domain
PRINTSPR003678.0E-5229245IPR001471AP2/ERF domain
PfamPF008473.8E-6366408IPR001471AP2/ERF domain
SMARTSM003801.1E-19367429IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.6E-19367424IPR001471AP2/ERF domain
PROSITE profilePS5103216.726367423IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-15367424IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
MEEHRPRCNA TAPSGRIAGG GKRKVAAVAG APAEPRYRGV LRRRRGRYVA RTYDRKGNQM  60
WLCTFDTAEE ASRRYDSETR RLHGSSAITN FPATSDNRVP LLAPSLHAVD EHSFAADESQ  120
PVVESSVSTT PPPKPVDATA ETLSTFSSSD EADAGGGAEA AAGPRKFVME IHMEEHHPRC  180
NATVPTGRVA GGSKRKAAAA GASAEPRYKG VLRRRRGRYA VRTCDRKGKR MWLSTFDTAE  240
EAARRYDSET RRLRGSSAIT NFPATSDDRV SLPAPSLHAV DKHSFAADES QPVKPVDDAA  300
ETLSMFSSSD EVDDGGGAEA AAGSRKFVME IHMEEHRPRC NATTPTGRVA SGGKRKAAAA  360
SAPAEPRYRG VLRRRRGRYV ARTRDRKGKR MCLGTFDTAG EAARRYDSET RRLRGPSAIT  420
NFPVTSDDRV PLPVPSLHAV DEHSFAADES
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1353375KRKAAAASAPAEPRYRGVLRRRR
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G703514
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G703514_P04
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7277130.0KJ727713.1 Zea mays clone pUT5652 AP2-EREBP transcription factor (EREB123) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020396639.11e-126AP2/ERF and B3 domain-containing protein Os05g0549800
TrEMBLA0A1D6JRM70.0A0A1D6JRM7_MAIZE; Uncharacterized protein
STRINGGRMZM2G703514_P020.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-11ERF family protein