PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G703514_P03
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family AP2
Protein Properties Length: 501aa    MW: 54539 Da    PI: 10.704
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G703514_P03genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.72.2e-113584155
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       ++y+GV +++ rgr+vA+ +d   ++   + +l +f+taeeA ++++   ++l+g
  GRMZM2G703514_P03 35 PRYRGVLRRR-RGRYVARTYD---RK-GNQMWLCTFDTAEEASRRYDSETRRLHG 84
                       68****8666.8******666...32.59******************99888887 PP

2AP239.61.3e-12206255155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        ++ykGV +++ rgr++++ +d   ++  kr +l +f+taeeAa++++   ++l+g
  GRMZM2G703514_P03 206 PRYKGVLRRR-RGRYAVRTCD---RK-GKRMWLSTFDTAEEAARRYDSETRRLRG 255
                        68****8666.8****99444...32.5*******************98888887 PP

3AP236.41.3e-11377426155
                AP2   1 sgykGV.rwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        ++y+G  rw+  rgr+ A+ rd      + kr +lg+f+t eeAa++++   ++l+g
  GRMZM2G703514_P03 377 PRYRGMlRWR--RGRYIARTRDR-----KgKRMWLGTFDTTEEAARRYDSETRRLRG 426
                        6899999996..5******9993.....34*******************99888887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.4E-63577IPR001471AP2/ERF domain
PROSITE profilePS5103216.1473692IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-173693IPR001471AP2/ERF domain
SMARTSM003806.1E-173698IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-133693IPR016177DNA-binding domain
CDDcd000182.28E-12206265No hitNo description
PfamPF008471.5E-8206248IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.0E-18207264IPR001471AP2/ERF domain
PROSITE profilePS5103216.937207263IPR001471AP2/ERF domain
SMARTSM003807.5E-17207269IPR001471AP2/ERF domain
SuperFamilySSF541716.08E-13207264IPR016177DNA-binding domain
PRINTSPR003679.6E-5208219IPR001471AP2/ERF domain
PRINTSPR003679.6E-5229245IPR001471AP2/ERF domain
CDDcd000181.71E-16377435No hitNo description
PfamPF008474.0E-6377419IPR001471AP2/ERF domain
PROSITE profilePS5103217.728378434IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.1E-18378435IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-14378435IPR016177DNA-binding domain
SMARTSM003803.0E-16378440IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000037anatomyshoot apex
PO:0006310anatomytassel floret
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0006341anatomyprimary shoot system
PO:0006354anatomyear floret
PO:0006505anatomycentral spike of ear inflorescence
PO:0008018anatomytransition vascular leaf
PO:0009001anatomyfruit
PO:0009009anatomyplant embryo
PO:0009025anatomyvascular leaf
PO:0009054anatomyinflorescence bract
PO:0009066anatomyanther
PO:0009074anatomystyle
PO:0009084anatomypericarp
PO:0009089anatomyendosperm
PO:0020040anatomyleaf base
PO:0020104anatomyleaf sheath
PO:0020126anatomytassel inflorescence
PO:0020127anatomyprimary root
PO:0020136anatomyear inflorescence
PO:0020142anatomystem internode
PO:0020148anatomyshoot apical meristem
PO:0025142anatomyleaf tip
PO:0025287anatomyseedling coleoptile
PO:0001007developmental stagepollen development stage
PO:0001009developmental stageD pollen mother cell meiosis stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001083developmental stageinflorescence development stage
PO:0001094developmental stageplant embryo coleoptilar stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0001180developmental stageplant proembryo stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007003developmental stageIL.03 full inflorescence length reached stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007015developmental stageradicle emergence stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007022developmental stageseed imbibition stage
PO:0007026developmental stageFL.00 first flower(s) open stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007032developmental stagewhole plant fruit formation stage up to 10%
PO:0007045developmental stagecoleoptile emergence stage
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007094developmental stageLP.01 one leaf visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007104developmental stageLP.15 fifteen leaves visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007112developmental stage1 main shoot growth stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007123developmental stageLP.06 six leaves visible stage
PO:0007633developmental stageendosperm development stage
PO:0021004developmental stageinflorescence initiation stage
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
MEEHRPRCNA TAPSGRIAGG GKRKVAAVAG APAEPRYRGV LRRRRGRYVA RTYDRKGNQM  60
WLCTFDTAEE ASRRYDSETR RLHGSSAITN FPATSDNRVP LLAPSLHAVD EHSFAADESQ  120
PVVESSVSTT PPPKPVDATA ETLSTFSSSD EADAGGGAEA AAGPRKFVME IHMEEHHPRC  180
NATVPTGRVA GGSKRKAAAA GASAEPRYKG VLRRRRGRYA VRTCDRKGKR MWLSTFDTAE  240
EAARRYDSET RRLRGSSAIT NFPATSDDRV SLPAPSLHAV DKHSFAADES QPVVGSPVST  300
TPLPKHVDAA AETLSMFSSS DEADAGGGAE AAAGPRKFVM EIHMEEHRPR CNATVPTGRV  360
AGGGKRKAAA ASASAEPRYR GMLRWRRGRY IARTRDRKGK RMWLGTFDTT EEAARRYDSE  420
TRRLRGPSAI TNFPAMSDDR VPLPTPLLHA VDEHSFAPDE SQPVVGSPVS TTPPPKPVDA  480
VAETRGRRRR NPLHVLLQRR G
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1193215KRKAAAAGASAEPRYKGVLRRRR
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G703514
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G703514_P03
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7277130.0KJ727713.1 Zea mays clone pUT5652 AP2-EREBP transcription factor (EREB123) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020396639.11e-137AP2/ERF and B3 domain-containing protein Os05g0549800
TrEMBLA0A1D6JRM70.0A0A1D6JRM7_MAIZE; Uncharacterized protein
STRINGGRMZM2G703514_P020.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-11ERF family protein