PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G703514_P01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | AP2 | ||||||||
Protein Properties | Length: 1757aa MW: 190219 Da PI: 10.5791 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.6 | 1e-10 | 35 | 84 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GV +++ rgr+vA+ +d ++ + +l +f+taeeA ++++ ++l+g GRMZM2G703514_P01 35 PRYRGVLRRR-RGRYVARTYD---RK-GNQMWLCTFDTAEEASRRYDSETRRLHG 84 68****8666.8******666...32.59******************98888887 PP | |||||||
2 | AP2 | 37.5 | 5.8e-12 | 206 | 255 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGV +++ rgr++++ +d ++ kr +l +f+taeeAa++++ ++l+g GRMZM2G703514_P01 206 PRYKGVLRRR-RGRYAVRTCD---RK-GKRMWLSTFDTAEEAARRYDSETRRLRG 255 68****8666.8****99444...32.5*******************98888887 PP | |||||||
3 | AP2 | 34.3 | 6e-11 | 377 | 426 | 1 | 55 |
AP2 1 sgykGV.rwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+G rw+ rgr+ A+ rd + kr +lg+f+t eeAa++++ ++l+g GRMZM2G703514_P01 377 PRYRGMlRWR--RGRYIARTRDR-----KgKRMWLGTFDTTEEAARRYDSETRRLRG 426 6899999996..5******9993.....34*******************99888887 PP | |||||||
4 | AP2 | 25.1 | 4.5e-08 | 519 | 557 | 1 | 44 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAak 44 ++y+GV +++ rgr+vA+ rd + kr lg+f+ta eAa+ GRMZM2G703514_P01 519 PRYRGVLRRR-RGRYVARTRDR-----KgKRMCLGTFDTAGEAAR 557 68****8666.8******9993.....34**********999998 PP | |||||||
5 | AP2 | 34.2 | 6.3e-11 | 608 | 657 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GV +++ rgr+vA+ +d ++ + +l +f+tae+Aa++++ ++l+g GRMZM2G703514_P01 608 PRYRGVLRRR-RGRYVARTCD---RK-GNQMWLCTFDTAEKAARRYDSETRRLHG 657 68****8666.8******555...32.59******************99999987 PP | |||||||
6 | AP2 | 41.1 | 4.5e-13 | 779 | 828 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GV +++ rgr+v++ +d ++ kr +lg+f+taeeAa++++ ++l+g GRMZM2G703514_P01 779 PRYRGVLRRR-RGRYVVRTCD---RK-GKRMWLGTFDTAEEAARRYDSETRQLRG 828 68****8666.8****99444...32.5*******************87777665 PP | |||||||
7 | AP2 | 31.1 | 5.7e-10 | 950 | 999 | 1 | 55 |
AP2 1 sgykGV.rwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+G rw+ rgr++A+ +d + kr +lg f+taeeAa++++ ++l+g GRMZM2G703514_P01 950 PRYRGMlRWR--RGRYLARTHDR-----KgKRMWLGAFDTAEEAARRYDSETRRLRG 999 6899999996..5******8883.....34*******************99888887 PP | |||||||
8 | AP2 | 34.1 | 6.8e-11 | 1121 | 1170 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GV +++ rgr+vA+ rd + kr lg f+taeeAa++++ ++l+g GRMZM2G703514_P01 1121 PRYRGVLRRR-RGRYVARTRDR-----KgKRMCLGMFDTAEEAARRYDSETRRLRG 1170 68****8666.8******9993.....34*******************99888887 PP | |||||||
9 | AP2 | 34 | 7.3e-11 | 1292 | 1341 | 1 | 55 |
AP2 1 sgykGV.rwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+G rw+ rgr+vA+ rd kr ++g f+taeeAa++++ ++l+g GRMZM2G703514_P01 1292 PRYRGLlRWR--RGRYVARTRDqK-----GKRMWVGMFDTAEEAARRYDSETRRLRG 1341 6899999996..5******99933.....5*******************99888887 PP | |||||||
10 | AP2 | 31.6 | 4e-10 | 1469 | 1518 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GV +++ rgr+ A+ rd + kr lg+f+taeeA ++++ ++l+g GRMZM2G703514_P01 1469 PRYRGVLRRH-RGRYMARTRDR-----KgKRMCLGTFDTAEEATRRYDSETRRLRG 1518 68****8787.8******9993.....34*******************98888887 PP | |||||||
11 | AP2 | 33.8 | 8.3e-11 | 1640 | 1689 | 1 | 55 |
AP2 1 sgykGV.rwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GV rw+ rgr+vA+ rd + kr +lg f taee a++++ ++l+g GRMZM2G703514_P01 1640 PRYRGVlRWR--RGRYVARTRDR-----KgKRMWLGMFNTAEESARRYDSETRRLRG 1689 68****9997..5******9993.....34*******************98888887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 6.3E-6 | 35 | 77 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 6.1E-17 | 36 | 98 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 16.147 | 36 | 92 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.18E-12 | 36 | 93 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-16 | 36 | 93 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 6.7E-8 | 206 | 248 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.33E-11 | 206 | 265 | No hit | No description |
SuperFamily | SSF54171 | 3.01E-12 | 207 | 264 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 16.937 | 207 | 263 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 7.5E-17 | 207 | 269 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.3E-17 | 207 | 264 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.38E-15 | 377 | 435 | No hit | No description |
Pfam | PF00847 | 1.8E-5 | 377 | 419 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.0E-16 | 378 | 440 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.36E-14 | 378 | 435 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 17.728 | 378 | 434 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.4E-17 | 378 | 435 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.9E-4 | 520 | 567 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.96E-7 | 520 | 557 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 11.232 | 520 | 557 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.6E-9 | 520 | 557 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.0E-6 | 608 | 650 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.9E-17 | 609 | 671 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 16.015 | 609 | 665 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.48E-12 | 609 | 666 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 3.6E-17 | 609 | 666 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 7.7E-9 | 779 | 821 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 8.1E-19 | 780 | 842 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 17.477 | 780 | 836 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.6E-18 | 780 | 837 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 9.81E-14 | 780 | 837 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 2.6E-5 | 781 | 792 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 8.33E-11 | 800 | 838 | No hit | No description |
PRINTS | PR00367 | 2.6E-5 | 802 | 818 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.99E-14 | 950 | 1009 | No hit | No description |
Pfam | PF00847 | 2.2E-4 | 950 | 992 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.2E-14 | 951 | 1013 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.48E-13 | 951 | 1008 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 17.056 | 951 | 1007 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-15 | 951 | 1008 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.1E-5 | 1121 | 1163 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.24E-14 | 1122 | 1179 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 2.5E-19 | 1122 | 1184 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 16.871 | 1122 | 1178 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.5E-18 | 1122 | 1179 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 5.1E-5 | 1292 | 1334 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.1E-14 | 1293 | 1355 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 16.147 | 1293 | 1349 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.85E-13 | 1293 | 1349 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.4E-15 | 1293 | 1349 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.23E-10 | 1305 | 1348 | No hit | No description |
Pfam | PF00847 | 1.9E-5 | 1469 | 1511 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.16E-15 | 1469 | 1528 | No hit | No description |
PROSITE profile | PS51032 | 16.595 | 1470 | 1526 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.4E-18 | 1470 | 1532 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.79E-14 | 1470 | 1527 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.7E-18 | 1470 | 1527 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 7.1E-5 | 1640 | 1682 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.28E-14 | 1640 | 1696 | No hit | No description |
SMART | SM00380 | 9.8E-15 | 1641 | 1703 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 16.344 | 1641 | 1697 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 8.5E-13 | 1641 | 1697 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 6.1E-16 | 1641 | 1697 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1757 aa Download sequence Send to blast |
MEEHRPRCNA TAPSGRIAGG GKRKVAAVAG APAEPRYRGV LRRRRGRYVA RTYDRKGNQM 60 WLCTFDTAEE ASRRYDSETR RLHGSSAITN FPATSDNRVP LLAPSLHAVD EHSFAADESQ 120 PVVESSVSTT PPPKPVDATA ETLSTFSSSD EADAGGGAEA AAGPRKFVME IHMEEHHPRC 180 NATVPTGRVA GGSKRKAAAA GASAEPRYKG VLRRRRGRYA VRTCDRKGKR MWLSTFDTAE 240 EAARRYDSET RRLRGSSAIT NFPATSDDRV SLPAPSLHAV DKHSFAADES QPVVGSPVST 300 TPLPKHVDAA AETLSMFSSS DEADAGGGAE AAAGPRKFVM EIHMEEHRPR CNATVPTGRV 360 AGGGKRKAAA ASASAEPRYR GMLRWRRGRY IARTRDRKGK RMWLGTFDTT EEAARRYDSE 420 TRRLRGPSAI TNFPAMSDDR VPLPTPLLHA VDEHSFAPDE SQPVVDDGGG AEAAAGSRKF 480 VMEIHMEEHR PRCNATTPTG RVASGGKRKA AAASAPAEPR YRGVLRRRRG RYVARTRDRK 540 GKRMCLGTFD TAGEAARRLT PVAEPRKFVM EIHMEEHRPR CNATAPTRRV ACGGKRKVAA 600 VAGAPAEPRY RGVLRRRRGR YVARTCDRKG NQMWLCTFDT AEKAARRYDS ETRRLHGPSA 660 ITNFPATSDD CVPLLAPSLH AVDEHSFAAD ESQSVVGSSV STTPPLKPVD ATAETLSTFS 720 SSDEADAGGG AEAAGGRVSL LWKYTWRSTT HAVMPRAPTG RVAGGGKRKA AATGASAEPR 780 YRGVLRRRRG RYVVRTCDRK GKRMWLGTFD TAEEAARRYD SETRQLRGSS AIANFPATSD 840 DRVSLLAPSL HAVDKHSFAA DESQPVVGSP VSTTPLPKHV DAAAETPSMF SSSDEAHAGG 900 GAETAAGPRK FVMEIHMEEH RPCCNATVPT GRVAGGGKRK ATAASAPAEP RYRGMLRWRR 960 GRYLARTHDR KGKRMWLGAF DTAEEAARRY DSETRRLRGP SAITNFPATS DDRVPLPTSL 1020 QHAVDEHSFA ADESQPVVGS PVSTTPPPKL VDAAAETLST FSSSDEADAG GGAEAAAGSR 1080 KFVMEIHMEE HRPRCNATTP TGRVASGGKR KAAAASAPAE PRYRGVLRRR RGRYVARTRD 1140 RKGKRMCLGM FDTAEEAARR YDSETRRLRG PSAITNFPTT SDDRVPLPAP SLHAVDEHSF 1200 AADESQPVMG SSVSTTPPPK PVDATAETLS TFSSSDEADA GGGAEAATGP CKFVMEIHME 1260 EHHPRCNATA PTGRVAGGGK RKASTAGAPA EPRYRGLLRW RRGRYVARTR DQKGKRMWVG 1320 MFDTAEEAAR RYDSETRRLR GPSAITNFLA TSDDRVPLPA PLLHAVDEHS FAVDESQPVV 1380 GSPVSTAPPP KPVDAAAETL STFSSSDEAD AGGGAEAAAG SRKFVMEIHM EEHRPRCNAT 1440 APTGRVASGG KRKAAAASAP AAASAPAEPR YRGVLRRHRG RYMARTRDRK GKRMCLGTFD 1500 TAEEATRRYD SETRRLRGPS AITNFPTTSD DRVLLPAPSL HAVDEHSFAA DESQPVVGSS 1560 VSTTPPPKPV DATAETLSMF SSSDEADAGG GAEAAAGPCK FVMEIHMEEH HPRRNATAPT 1620 GRVAGGGKRK AATAGALAEP RYRGVLRWRR GRYVARTRDR KGKRMWLGMF NTAEESARRY 1680 DSETRRLRGP SAITNFLATS DDRVPLPAPL LHAVDEHSFA VDESQPVVGF TGLHHAATET 1740 RGRRRRNPLH VLLQRRG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 1108 | 1130 | KRKAAAASAPAEPRYRGVLRRRR |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G703514 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G703514_P01 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ727713 | 0.0 | KJ727713.1 Zea mays clone pUT5652 AP2-EREBP transcription factor (EREB123) gene, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020396639.1 | 1e-130 | AP2/ERF and B3 domain-containing protein Os05g0549800 | ||||
TrEMBL | A0A1D6JRM7 | 0.0 | A0A1D6JRM7_MAIZE; Uncharacterized protein | ||||
STRING | GRMZM2G703514_P02 | 0.0 | (Zea mays) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 5e-12 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G703514_P01 |