PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G700665_P01
Common NameZEAMMB73_516893, Zm.7856
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family AP2
Protein Properties Length: 322aa    MW: 36013.4 Da    PI: 11.8317
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G700665_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2271.1e-08152179133
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfsl 33 
                        s+y+GV++++++grW+++I+d      + k+++l
  GRMZM2G700665_P01 152 SQYRGVTFYRRTGRWESHIWD------CgKQVYL 179
                        78*******************......5598886 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000037anatomyshoot apex
PO:0006310anatomytassel floret
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0006341anatomyprimary shoot system
PO:0006354anatomyear floret
PO:0006505anatomycentral spike of ear inflorescence
PO:0008018anatomytransition vascular leaf
PO:0009001anatomyfruit
PO:0009009anatomyplant embryo
PO:0009025anatomyvascular leaf
PO:0009054anatomyinflorescence bract
PO:0009066anatomyanther
PO:0009074anatomystyle
PO:0009084anatomypericarp
PO:0009089anatomyendosperm
PO:0020040anatomyleaf base
PO:0020104anatomyleaf sheath
PO:0020126anatomytassel inflorescence
PO:0020127anatomyprimary root
PO:0020136anatomyear inflorescence
PO:0020142anatomystem internode
PO:0020148anatomyshoot apical meristem
PO:0025142anatomyleaf tip
PO:0025287anatomyseedling coleoptile
PO:0001007developmental stagepollen development stage
PO:0001009developmental stageD pollen mother cell meiosis stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001083developmental stageinflorescence development stage
PO:0001094developmental stageplant embryo coleoptilar stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0001180developmental stageplant proembryo stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007003developmental stageIL.03 full inflorescence length reached stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007015developmental stageradicle emergence stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007022developmental stageseed imbibition stage
PO:0007026developmental stageFL.00 first flower(s) open stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007032developmental stagewhole plant fruit formation stage up to 10%
PO:0007045developmental stagecoleoptile emergence stage
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007094developmental stageLP.01 one leaf visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007104developmental stageLP.15 fifteen leaves visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007112developmental stage1 main shoot growth stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007123developmental stageLP.06 six leaves visible stage
PO:0007633developmental stageendosperm development stage
PO:0021004developmental stageinflorescence initiation stage
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MQLDLNVAEA PPPVEMEASD SGSSVLNASE AASAGGAPAP AEEGSSSTPA VLEFSILIRS  60
DSDAAGADED EDATPSPPPR HRHQHQQQLV TRELFPAGAG PPAPTPRHWA ELGFFRADLQ  120
QQQAPGPRIV PHPHAAPPPA KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLV  180
VVRLLADIRR WIRHRSRRCK GVRPGGDQVP RRRRRHQLQP QRLRGRHEAD GEPVQGGVRA  240
RPAPSEHRLL ERQLQVQRRH PAQVRPLGGA HGAVPRQEVH IPWAIRQRSR GCKSLRQGRH  300
QMQWQRGRDE LRAEHVSRGA AD
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.348850.0cell culture
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G700665
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor (By similarity). Involved in spikelet transition. Regulator of starch biosynthesis especially during seed development (e.g. endosperm starch granules); represses the expression of type I starch synthesis genes. Prevents lemma and palea elongation as well as grain growth (By similarity). {ECO:0000250|UniProtKB:P47927, ECO:0000250|UniProtKB:Q2TQ34}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G700665_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0843090.0BT084309.2 Zea mays full-length cDNA clone ZM_BFb0100C04 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008656536.11e-121floral homeotic protein APETALA 2 isoform X1
RefseqXP_008656537.11e-121ethylene-responsive transcription factor RAP2-7 isoform X2
SwissprotB8AXC35e-37AP21_ORYSI; APETALA2-like protein 1
TrEMBLA0A1D6FVE91e-140A0A1D6FVE9_MAIZE; Rap2.7-like protein
STRINGGRMZM2G700665_P031e-120(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54990.24e-14AP2 family protein