PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G475678_P01
Common NameEREB61, LOC103646120
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 356aa    MW: 37783.3 Da    PI: 4.5843
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G475678_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.4e-20153204256
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        +y+GVr+++ +g+++AeIrdp+ +g   r++lg+++t+ eAa+a+++a+ +++g+
  GRMZM2G475678_P01 153 KYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTYDTPVEAARAYDRAAFRMRGA 204
                        8********.**********96554..**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.0E-32152212IPR001471AP2/ERF domain
PROSITE profilePS5103224.105153211IPR001471AP2/ERF domain
CDDcd000182.07E-30153212No hitNo description
SuperFamilySSF541711.05E-22153212IPR016177DNA-binding domain
PfamPF008472.5E-14153203IPR001471AP2/ERF domain
SMARTSM003804.9E-37153217IPR001471AP2/ERF domain
PRINTSPR003671.9E-13154165IPR001471AP2/ERF domain
PRINTSPR003671.9E-13193213IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MAFTGDADGF ALDFIREHLL GAGCGGDPDP VHCTVDLDGD DITFPVLPPP QPEFEPMPFL  60
PPPPPPPQHQ HQGYIGVDPT NEYMGEPAAV FPEQEPAPPV IITFGSEPSS PVKQPLTIAV  120
PPRPYYASAA AATAPTAAQL VAAAAEAVED FRKYRGVRQR PWGKYAAEIR DPKRRGSRVW  180
LGTYDTPVEA ARAYDRAAFR MRGAKAILNF PNEVGTRGAD FWAPPAPAKK ADTAAANKRK  240
RQQLVEDADG DDVEVVAVVV SKAAKVVDEI PASSPSQDQT SCTSRSSSVS TRETTATASS  300
TVTSAAEETG SGAVGLPMTP SSGNWEQYWE ALLGSLPLLS PQSPLPALGF PQLTVT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-26152216468ATERF1
3gcc_A6e-26152216468ATERF1
5wx9_A7e-261532131474Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G475678
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G475678_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7275250.0KJ727525.1 Zea mays clone pUT5385 AP2-EREBP transcription factor (EREB61) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008669061.20.0ethylene-responsive transcription factor ERF061
TrEMBLA0A060CWZ90.0A0A060CWZ9_MAIZE; AP2-EREBP transcription factor (Fragment)
TrEMBLA0A3L6FXI00.0A0A3L6FXI0_MAIZE; Ethylene-responsive transcription factor 5
STRINGGRMZM2G475678_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.16e-32ethylene responsive element binding factor 5