PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G451035_P01
Common NameLOC103654284, ZEAMMB73_288331
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 305aa    MW: 33982.3 Da    PI: 7.0397
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G451035_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY24.26.6e-081702162159
                        -EEEEEE-ST...T---EEEEEE-SSSTT.....EEEEEEES--SS- CS
               WRKY  21 prsYYrCtsa...gCpvkkkversaedpk.....vveitYegeHnhe 59 
                         rsYYrC+++   gCp++k v++++  ++     ++++ Y g+H ++
  GRMZM2G451035_P01 170 NRSYYRCAYSkelGCPATKTVQQKEGGGNygtvrLFDVDYYGQHICN 216
                        6*******998999*********997765222226889999999886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.2E-18116216IPR003657WRKY domain
SuperFamilySSF1182907.85E-12124216IPR003657WRKY domain
SMARTSM007741.6E-22130217IPR003657WRKY domain
PfamPF031065.2E-5132151IPR003657WRKY domain
PfamPF031067.8E-10169215IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006340anatomyadult vascular leaf
PO:0006505anatomycentral spike of ear inflorescence
PO:0009025anatomyvascular leaf
PO:0020126anatomytassel inflorescence
PO:0025142anatomyleaf tip
PO:0001007developmental stagepollen development stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007104developmental stageLP.15 fifteen leaves visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MNILESSDLG GYKEVKVMDE IEHQRALMVD LHDLVLPILD PCSGQAKLVQ QLFEEVFSCS  60
GKIISSLQPG RNDREKQAIL IKCKRKGCMG NVENNRVSEE NDGGGGKGRG NRRRKNAKHV  120
VSSVVTQAPN FDGYQWRKYG QKWISKAKHS RYDPNNAKKR GLMHEVIMSN RSYYRCAYSK  180
ELGCPATKTV QQKEGGGNYG TVRLFDVDYY GQHICNSHGR IVHPNVVVDE PATHDDGGVP  240
IVNQSSSSST SYAHGVQDES FGDLFMVPDM PEYLTELTDV EMANAFGFTA SMNSPLLVSE  300
DILWA
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.919955e-45ear| meristem| root
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G451035
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G451035_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9441873e-61EU944187.1 Zea mays clone 1711434 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021317522.11e-122probable WRKY transcription factor 67
TrEMBLK7U6F30.0K7U6F3_MAIZE; Putative WRKY DNA-binding domain superfamily protein
STRINGGRMZM2G451035_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP133251529
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01900.13e-13WRKY DNA-binding protein 62