PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G448607_P01
Common NamebZIP12, Zm.367
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 135aa    MW: 15008.9 Da    PI: 10.8512
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G448607_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.72.5e-131964550
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
                       ++ +r+ +NRe+ArrsR+RK++++eeL  +v+ L+aeN a + +  
  GRMZM2G448607_P01 19 RKRKRMLSNRESARRSRARKQQRLEELVAEVARLQAENAATQARTA 64
                       678999********************************87666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.9E-14772No hitNo description
SMARTSM003381.8E-181579IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.4381780IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-101970No hitNo description
PfamPF001702.8E-91961IPR004827Basic-leucine zipper domain
PROSITE patternPS0003602237IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MSSSRRSSSP DSNDTTDERK RKRMLSNRES ARRSRARKQQ RLEELVAEVA RLQAENAATQ  60
ARTAALERDL GRVDGDNAVL RARHAELAGR LQSLGGVLEV LQMAGAAVDI PEMVTDDPML  120
RPWQPSFPPM QPIGF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13138RRSRARKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.3670.0cell culture| ear| endosperm| glume| leaf| meristem| root| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G448607
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Roots and shoots of young plants, and basal portion of leaves.
Functional Description ? help Back to Top
Source Description
UniProtMay contribute to developmentally specific patterns of gene expression. Binds specifically to ocs elements which are transcriptional enhancer found in the promoters of several plant genes. OCSBF-1 is able to bind to a site within each half of the ocs element as well as to animal AP-1 and CREB sites.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G448607_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0091780.0BT009178.1 Triticum aestivum clone wl1n.pk0114.f9:fis, full insert mRNA sequence.
GenBankBT0685780.0BT068578.2 Zea mays full-length cDNA clone ZM_BFb0345C11 mRNA, complete cds.
GenBankEU9770260.0EU977026.1 Zea mays clone 996656 ocs element-binding factor 1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001105684.24e-92low temperature-induced protein15
SwissprotP240683e-32OCS1_MAIZE; Ocs element-binding factor 1
TrEMBLA0A3L6E7E99e-91A0A3L6E7E9_MAIZE; Ocs element-binding factor 1
TrEMBLB6UIG19e-91B6UIG1_MAIZE; BZIP transcription factor
STRINGGRMZM2G448607_P011e-91(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP188635100
Representative plantOGRP5511678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.19e-17basic region/leucine zipper motif 53
Publications ? help Back to Top
  1. Alexandrov NN, et al.
    Insights into corn genes derived from large-scale cDNA sequencing.
    Plant Mol. Biol., 2009. 69(1-2): p. 179-94
    [PMID:18937034]
  2. Singh K, et al.
    OCSBF-1, a maize ocs enhancer binding factor: isolation and expression during development.
    Plant Cell, 1990. 2(9): p. 891-903
    [PMID:2152133]