PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G447551_P01
Common NameLOC103631862, Zm.141574
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family CAMTA
Protein Properties Length: 1025aa    MW: 114417 Da    PI: 6.3786
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G447551_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1177.81.3e-55191362118
               CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 
                        lke ++rwl++ ei++iL+n+++++++ e+++rp+sgsl+L++rk++ryfrkDG+sw+kkkdgktv+E+he+LK g+v+vl+cyYah+e n+
  GRMZM2G447551_P01  19 LKEaQHRWLRPAEICEILKNYRNFHIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHSWRKKKDGKTVKEAHERLKSGSVDVLHCYYAHGEGNE 110
                        45559*************************************************************************************** PP

               CG-1  93 tfqrrcywlLeeelekivlvhylevk 118
                        +fqrr+yw+Lee++ +ivlvhylevk
  GRMZM2G447551_P01 111 NFQRRSYWMLEEDFMHIVLVHYLEVK 136
                        ***********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143782.72715141IPR005559CG-1 DNA-binding domain
SMARTSM010763.1E-7818136IPR005559CG-1 DNA-binding domain
PfamPF038591.9E-4921135IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.3E-6420525IPR013783Immunoglobulin-like fold
CDDcd001020.0019440527No hitNo description
PfamPF018331.7E-6441519IPR002909IPT domain
SuperFamilySSF812963.4E-17441526IPR014756Immunoglobulin E-set
SuperFamilySSF484035.75E-18619735IPR020683Ankyrin repeat-containing domain
CDDcd002041.43E-15621733No hitNo description
Gene3DG3DSA:1.25.40.208.0E-18632738IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029718.324632745IPR020683Ankyrin repeat-containing domain
PROSITE profilePS500889.351641673IPR002110Ankyrin repeat
SMARTSM002481100641670IPR002110Ankyrin repeat
PROSITE profilePS500888.736674706IPR002110Ankyrin repeat
SMARTSM002480.013674703IPR002110Ankyrin repeat
SMARTSM002483500713742IPR002110Ankyrin repeat
SuperFamilySSF525401.89E-8845898IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.07847869IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.169848877IPR000048IQ motif, EF-hand binding site
PfamPF006120.0029849868IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0022870892IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.578871895IPR000048IQ motif, EF-hand binding site
PfamPF006122.0E-4873892IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1025 aa     Download sequence    Send to blast
MAEARRHAVA PQLDIEQILK EAQHRWLRPA EICEILKNYR NFHIAPEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHSWRKKKD GKTVKEAHER LKSGSVDVLH CYYAHGEGNE NFQRRSYWML  120
EEDFMHIVLV HYLEVKGGKS TSRIRGHDDM LQAARTDSPL SQLPSQTTEG GNSLSGQASE  180
YEETESDIYS GGAGYHPFSW TQHHENGGGP VIGTSIPSSY VPALPLGNLQ GFPATVTNTD  240
IYSRQDALPV TLNEPGLAIE FNGADNQLDP SSLNGLVKPF LQMSTPQSTV PSELFPFTEE  300
HGNESFTFHE VYSNGLSIKD AEIVGTNEES VWKLPGAISS IPSEDSFQQN DRSLEETISY  360
PLLKTRSSNL SEMLKDSFKK SDSFTRWMSK ALGEVDSQIK SSSGVYWNSE ETNNIIETSS  420
CDQLDQCTID PVLAQEQLFS IVDFSPSWTY AGSKTRVLIN GKFLNSAELK RCKWSCMFGE  480
VEVPAEISAD GILRCYSPSH KPGRVPFYVT CTNRLACSEI REFEFRPSVT QYMDAPSPHG  540
ATNKTYLQMR LDNLLSLGHN EYQATVSNPT KEMVDLSKKI SSLMTDNDSW SQLLKLASDN  600
EPVTDDDQDE FFEKHLKEKL HIWLVHKASD GGKGPNVLDD EGQGVLHLAA ALGYDWVIRP  660
AVSAGVNINF RDAHGWTALH WAAFCGRERT VVALIALGAA PGALTDPTPI FPTGSTPADL  720
ASANGYKGIS GFLAESSLTS HLQTLDLKEG KGSNPPEISG LPGIGDVTER RASPLAGEGL  780
QAGSMGDSLG AIRNAAQAAA RIYQVFRVQS FQRKQAVQYE DDNGAVSDDR AISLLSVKPS  840
KPVQLDPLHA AATRIQNKYR GWKGRKEFLL IRQRIVKIQA HVRGHQVRKH YRKIIWSVGI  900
VEKIILRWRR KGAGLRGFRS TEGATVGSSS NLIQNKPEDD YDFLQQGRKQ TEERLQKALA  960
RVKSMAQYPD ARDQYQRILT VVTKIQESKA MQEKMLEEST EMDEGFFMSD FKELWDDDIP  1020
MPSWS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.1415747e-56meristem
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G447551
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G447551_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008651919.10.0calmodulin-binding transcription activator 1 isoform X2
TrEMBLA0A1D6JR860.0A0A1D6JR86_MAIZE; Calmodulin-binding transcription activator 2
STRINGGRMZM2G447551_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Representative plantOGRP5621565
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0signal responsive 1