PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G425920_P01
Common NameLOC100383828, ZEAMMB73_102801
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 215aa    MW: 23598.3 Da    PI: 11.0537
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G425920_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.32.6e-11110169261
                        XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                        ke  r +r+ +N ++A+  R+RKka++ eLe k+k Le  N +L +++++l++e  +l++
  GRMZM2G425920_P01 110 KEQNRLKRLLRNHVSAQQARERKKAYLTELEAKAKGLELRNAELEQRVSTLQNENNTLRQ 169
                        78899*************************************************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-10109173IPR004827Basic-leucine zipper domain
PfamPF001701.5E-9110169IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.162111171IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.6E-15114171No hitNo description
SuperFamilySSF579596.0E-11114170No hitNo description
CDDcd147044.09E-16114164No hitNo description
PROSITE patternPS000360116131IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MSSAREEEKK IDAEMRRRRS SRRRRAPRAR SPPAASAPPA PLATTSRKEG RRATRRYGGV  60
PEMGGASASA SSGAGADERP KGEDGKQGQV AAGAQPPAGG KKRGRTAGDK EQNRLKRLLR  120
NHVSAQQARE RKKAYLTELE AKAKGLELRN AELEQRVSTL QNENNTLRQV IDVSGKEFKF  180
TWASGRGELC DIYEERQSGE DGNGLLLECG STWRK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.241900.0cell culture| meristem
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G425920
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269|PubMed:15178762}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G425920_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0683930.0BT068393.1 Zea mays full-length cDNA clone ZM_BFb0155D12 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020400780.11e-152putative bZIP transcription factor superfamily protein isoform X1
SwissprotQ9SM501e-32HY5_SOLLC; Transcription factor HY5
TrEMBLA0A1D6J7Y31e-115A0A1D6J7Y3_MAIZE; Transcription factor HY5-like
TrEMBLC0PJC41e-115C0PJC4_MAIZE; Uncharacterized protein
TrEMBLK4JFH41e-115K4JFH4_MAIZE; BZIP-type transcription factor (Fragment)
STRINGGRMZM2G425920_P011e-152(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP140838111
Representative plantOGRP20811737
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.11e-25bZIP family protein
Publications ? help Back to Top
  1. Wang F, et al.
    Light Signaling-Dependent Regulation of Photoinhibition and Photoprotection in Tomato.
    Plant Physiol., 2018. 176(2): p. 1311-1326
    [PMID:29146776]
  2. Liu CC, et al.
    The bZip transcription factor HY5 mediates CRY1a-induced anthocyanin biosynthesis in tomato.
    Plant Cell Environ., 2018. 41(8): p. 1762-1775
    [PMID:29566255]