PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G389557_P01
Common NameZm.131471
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family NAC
Protein Properties Length: 268aa    MW: 30078.1 Da    PI: 9.6347
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G389557_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM139.22.6e-43121463128
                NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkya.......tgkrknratksgyWkat 86 
                        pGfrFhPt+eel+ +yLk+ ++g+kl++ ++i++v++y+++Pw+Lp  +   +e+ewyfF++rd   +       +g r++r+t++g+Wkat
  GRMZM2G389557_P01  12 PGFRFHPTEEELLEFYLKQAARGRKLKF-DIIPTVHLYRHDPWELPsLARVVGEREWYFFVPRDGGGRaakqqpgSGGRPSRTTERGFWKAT 102
                        9**************************9.99***************433335889******99854333333445677************** PP

                NAM  87 gkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        g+d++v ++   ++l+glkktLv+y+grap+g+ktdWvm+eyrl
  GRMZM2G389557_P01 103 GSDRAVRCAadPKRLIGLKKTLVYYEGRAPRGTKTDWVMNEYRL 146
                        *******98777788***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100550.81610171IPR003441NAC domain
SuperFamilySSF1019411.7E-5011171IPR003441NAC domain
PfamPF023655.5E-2412146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0008018anatomytransition vascular leaf
PO:0009009anatomyplant embryo
PO:0009025anatomyvascular leaf
PO:0020040anatomyleaf base
PO:0020142anatomystem internode
PO:0020148anatomyshoot apical meristem
PO:0025142anatomyleaf tip
PO:0025287anatomyseedling coleoptile
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007003developmental stageIL.03 full inflorescence length reached stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007045developmental stagecoleoptile emergence stage
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MAAEQQHQLD LPGFRFHPTE EELLEFYLKQ AARGRKLKFD IIPTVHLYRH DPWELPSLAR  60
VVGEREWYFF VPRDGGGRAA KQQPGSGGRP SRTTERGFWK ATGSDRAVRC AADPKRLIGL  120
KKTLVYYEGR APRGTKTDWV MNEYRLPDAA DASSDARVPQ VDVVLCKVYR KAVSLKELEQ  180
RVAMEELARA TATPSASHST GSPADSMSSS EIVMVPVGGV SLSPSAAMSM KREEAAKNQQ  240
QQDPFLTQLR SPRMESWWSA YYASVLNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-4341718168Stress-induced transcription factor NAC1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G389557
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G389557_P01
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9676330.0EU967633.1 Zea mays clone 304978 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008645096.10.0NAC domain-containing protein 35
SwissprotQ10S658e-88NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A1D6GWN40.0A0A1D6GWN4_MAIZE; NAC domain containing protein 36
TrEMBLA0A3L6ENQ80.0A0A3L6ENQ8_MAIZE; NAC domain-containing protein 35
STRINGGRMZM2G389557_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Representative plantOGRP1715800
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.12e-78NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]