PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G376255_P01
Common NameLOC103639528, ZEAMMB73_734065, Zm.32868
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 307aa    MW: 32716.4 Da    PI: 5.9476
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G376255_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-192776255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        y+GVr++  +g+WvAeIr+p   +kr+r +lg+f taeeAa a+++a+++l+g
  GRMZM2G376255_P01 27 EYRGVRQRT-WGKWVAEIREP---NKRARLWLGSFATAEEAALAYDEAARRLYG 76
                       69****999.**********9...337************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.01E-262686No hitNo description
SuperFamilySSF541712.16E-202785IPR016177DNA-binding domain
SMARTSM003801.1E-332790IPR001471AP2/ERF domain
PfamPF008471.5E-132776IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-292785IPR001471AP2/ERF domain
PROSITE profilePS5103222.1812784IPR001471AP2/ERF domain
PRINTSPR003674.5E-102839IPR001471AP2/ERF domain
PRINTSPR003674.5E-105066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MESYGHKRAW KKEPTRGKGG PQNAACEYRG VRQRTWGKWV AEIREPNKRA RLWLGSFATA  60
EEAALAYDEA ARRLYGTDVF LNLPHLRASG VSAAGAGNAH ERLRWLPAAS ARGAAVPAYG  120
LLNLNAQHNV HVIHQRLQEL KNNGSPADHL PAAASTSPCS TVTTRAAAAL PAPMSCFHAL  180
EQAVTTVATR TTVDDAEPCE GGACPSGADK PQIDLSEFLQ QIGVLNNTDD DGIRTTAKAS  240
FRGDAAEAGC FGGNGEFDWD ALAADLNDIA GAGVHGGVNG GFQMDDLHEH EVEQFGTCLP  300
IPVWDVQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-172884663ATERF1
3gcc_A4e-172884663ATERF1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO169162980.0
Expression AtlasGRMZM2G376255-
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional activator that binds to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00411DAPTransfer from AT3G57600Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G376255_P01
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Not induced by high-salt and drought stresses. {ECO:0000269|PubMed:20049613}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7284071e-155KJ728407.1 Zea mays clone pUT6712 AP2-EREBP transcription factor (EREB124) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008660491.10.0dehydration-responsive element-binding protein 2E
SwissprotQ10R181e-115DRE2E_ORYSJ; Dehydration-responsive element-binding protein 2E
TrEMBLK7W2Q80.0K7W2Q8_MAIZE; Putative AP2/EREBP transcription factor superfamily protein
STRINGGRMZM2G376255_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP95752939
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.13e-46ERF family protein