PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G374986_P01
Common NameZEAMMB73_348968, Zm.43517
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family G2-like
Protein Properties Length: 391aa    MW: 42557.7 Da    PI: 9.2413
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G374986_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.17.2e-322477255
            G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                       prlrWtp+LH++Fv+a+++LGG+++AtPk++l+lm+v gLt++hvkSHLQ+YR 
  GRMZM2G374986_P01 24 PRLRWTPDLHHCFVHAIHKLGGPDRATPKRVLQLMGVGGLTISHVKSHLQMYRN 77
                       8****************************************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.4E-312080IPR009057Homeodomain-like
PROSITE profilePS5129412.3232080IPR017930Myb domain
SuperFamilySSF466897.7E-162279IPR009057Homeodomain-like
TIGRFAMsTIGR015572.8E-242477IPR006447Myb domain, plants
PfamPF002499.8E-102576IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0006354anatomyear floret
PO:0006505anatomycentral spike of ear inflorescence
PO:0008018anatomytransition vascular leaf
PO:0009001anatomyfruit
PO:0009025anatomyvascular leaf
PO:0009054anatomyinflorescence bract
PO:0009074anatomystyle
PO:0009084anatomypericarp
PO:0009089anatomyendosperm
PO:0020040anatomyleaf base
PO:0020126anatomytassel inflorescence
PO:0020136anatomyear inflorescence
PO:0020142anatomystem internode
PO:0025142anatomyleaf tip
PO:0001009developmental stageD pollen mother cell meiosis stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001083developmental stageinflorescence development stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0001180developmental stageplant proembryo stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007003developmental stageIL.03 full inflorescence length reached stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007026developmental stageFL.00 first flower(s) open stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007032developmental stagewhole plant fruit formation stage up to 10%
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007633developmental stageendosperm development stage
PO:0021004developmental stageinflorescence initiation stage
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MVRTTVVGRE RSGGVRQYNR SKVPRLRWTP DLHHCFVHAI HKLGGPDRAT PKRVLQLMGV  60
GGLTISHVKS HLQMYRNMRN DLGMQGTEDQ EHVYVGGGGM HTNIQQQRDH GCGDAPCCIC  120
CRHSPNKPAK EEEEATLFQR QLKRSRTETR RGRGQREEID DGSASPKRRL LLLRGGRGRP  180
GICESDGSGS PSSGTLASGY DNYMRMMQAA MGVAAAAGAA AAAAPHHHHH HHAETVEPGR  240
GPRIKQHLAR PGADGGEHAP PSSRQLFTFL GFVVAPGPPP PPCCSRDHPF EAERLNLHAH  300
SLAPEQARRH KHGLQTPPTK AAVAQQVGGD PCWSSAAASE HDDHHHDRDR DGCWLSLSLA  360
LETRSSRSAD EGGRLSPTGS RISLDLSLST I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A3e-172579357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-172579357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-172579357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-172579357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G374986
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G374986_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0689101e-113BT068910.1 Zea mays full-length cDNA clone ZM_BFc0191L18 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008660542.10.0uncharacterized protein LOC103639589
TrEMBLA0A3L6D8K30.0A0A3L6D8K3_MAIZE; Putative Myb family transcription factor
STRINGGRMZM2G374986_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76102950
Representative plantOGRP28515123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.12e-31G2-like family protein