PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G370026_P01 | ||||||||
Common Name | LOC103640895 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 187aa MW: 20099.5 Da PI: 11.7403 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.2 | 1.6e-12 | 82 | 130 | 2 | 50 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++++r rr+++NRe+ArrsR+RK+ +eeL+ +++ L a N++L+ +l GRMZM2G370026_P01 82 ERRRRLRRRISNRESARRSRARKQRHLEELRGRAARLRAGNRDLAARLG 130 56899***************************************99875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.3E-6 | 79 | 145 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.6E-9 | 82 | 130 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.852 | 83 | 129 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.85E-9 | 85 | 130 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.6E-7 | 85 | 133 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 88 | 103 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MAHQQQQFPT LSEWDPTLDL EALLSDIGFG LLGPDEPTTP ASASASPTDA TTSATPPEHD 60 ASASLTSAGP EAAAADENEL AERRRRLRRR ISNRESARRS RARKQRHLEE LRGRAARLRA 120 GNRDLAARLG GAQARAALAR LANARLRAEA GALARRLYAA RRALALRQVY AASGGSFDLQ 180 VLASLMA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 97 | 104 | RRSRARKQ |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G370026 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G370026_P01 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008662569.1 | 1e-124 | ocs element-binding factor 1-like | ||||
TrEMBL | A0A1D6KGU5 | 1e-123 | A0A1D6KGU5_MAIZE; BZIP transcription factor family protein expressed | ||||
STRING | GRMZM2G370026_P01 | 1e-123 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15125 | 19 | 19 | Representative plant | OGRP8744 | 8 | 15 |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G370026_P01 |
Entrez Gene | 103640895 |