PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G369799_P01
Common NameLOC103650675, MYB127, Zm.13484
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family MYB
Protein Properties Length: 264aa    MW: 27798.1 Da    PI: 8.8837
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G369799_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.18.8e-182065147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       +g+W++eEd ll ++v+q+G+++W++I++ ++ gR++k+c++rw + 
  GRMZM2G369799_P01 20 KGSWSPEEDALLTRLVEQHGPHRWSLISAPIP-GRSGKSCRLRWCNQ 65
                       799*****************************.***********985 PP

2Myb_DNA-binding56.56.6e-1874116347
                        SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        ++T+ Ed l++ a++++G++ W+tIar ++ gRt++++k++w++ 
  GRMZM2G369799_P01  74 PFTPHEDALILAAHARYGNK-WATIARLLP-GRTDNSIKNHWNSN 116
                        89******************.*********.***********976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129424.9251570IPR017930Myb domain
SuperFamilySSF466892.77E-3117113IPR009057Homeodomain-like
SMARTSM007174.8E-161968IPR001005SANT/Myb domain
PfamPF002492.4E-172065IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.2E-252173IPR009057Homeodomain-like
CDDcd001672.34E-142264No hitNo description
PROSITE profilePS5129419.32771121IPR017930Myb domain
SMARTSM007172.0E-1571119IPR001005SANT/Myb domain
PfamPF002497.2E-1574116IPR001005SANT/Myb domain
CDDcd001672.35E-1274117No hitNo description
Gene3DG3DSA:1.10.10.605.0E-2374119IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MMKNYPGPAS SSSVAVEVKK GSWSPEEDAL LTRLVEQHGP HRWSLISAPI PGRSGKSCRL  60
RWCNQLSPDV HHRPFTPHED ALILAAHARY GNKWATIARL LPGRTDNSIK NHWNSNLRRC  120
RRRAAAAAVA SRPQVQDSDD APAAAAAHDD QPAAVVAAGG LGGGNSSSGL PPAAAGAATA  180
EAEPSLSLSL GLPLPAAEPA EAAADDESRN SQGQASPLLE EGEGNAQLLA VVRRMVREEV  240
QRQTGQLAYS LMAAAAARAK GHHR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A1e-37171191103MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.134840.0endosperm
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G369799
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G369799_P01
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7275240.0KJ727524.1 Zea mays clone pUT5383 MYB transcription factor (MYB127) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008674458.10.0transcription factor MYB44
SwissprotO231601e-51MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A060D1560.0A0A060D156_MAIZE; MYB transcription factor (Fragment)
TrEMBLA0A3L6FND40.0A0A3L6FND4_MAIZE; Transcription factor MYB44
STRINGGRMZM2G369799_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP135442731
Representative plantOGRP5171784
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.14e-49myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]