PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G366264_P01 | ||||||||
Common Name | ZEAMMB73_908479 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 310aa MW: 34377.3 Da PI: 8.3495 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34 | 6.3e-11 | 16 | 41 | 8 | 33 |
HCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 8 rrkqkNReAArrsRqRKkaeieeLee 33 rr+++NReAAr+sR+RKka+i++Le GRMZM2G366264_P01 16 RRLAQNREAARKSRLRKKAYIQQLES 41 9***********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.3E-8 | 15 | 54 | No hit | No description |
Pfam | PF00170 | 2.8E-8 | 15 | 42 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 16 | 31 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.25E-7 | 16 | 59 | No hit | No description |
Pfam | PF14144 | 3.8E-29 | 96 | 168 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0006310 | anatomy | tassel floret | ||||
PO:0006340 | anatomy | adult vascular leaf | ||||
PO:0009025 | anatomy | vascular leaf | ||||
PO:0009054 | anatomy | inflorescence bract | ||||
PO:0009066 | anatomy | anther | ||||
PO:0020136 | anatomy | ear inflorescence | ||||
PO:0025142 | anatomy | leaf tip | ||||
PO:0001007 | developmental stage | pollen development stage | ||||
PO:0001052 | developmental stage | vascular leaf expansion stage | ||||
PO:0007026 | developmental stage | FL.00 first flower(s) open stage | ||||
PO:0007101 | developmental stage | LP.09 nine leaves visible stage |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence Send to blast |
MATLGQWRLK HFLTIRRLAQ NREAARKSRL RKKAYIQQLE SSKLKLAQME RDMQRAHSQP 60 QGVFLGGAPG ANASSGAAMI DAEYARWLDD QGQRKAELQG ALQAHLPDGD LQAIVDDTLT 120 HHDELFRLKA SAAKSDVFHV ITGAWTTPAE RCFLWMGGFR PSDLVKTLLP QLDPLTEQQQ 180 LVGICNLKQS SQQAEEALSQ GLDQLHQSLA DTMANGSLID DTSMSFMGQM ALALGKLSSL 240 EVFVIQADNL RQQTLHQMRR ILTVRQAARC FLAIAGYQNR LRALSSLWVS RPREILVADE 300 GDCGEMSAAA |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G366264 |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G366264_P01 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008662470.1 | 0.0 | transcription factor TGAL11 | ||||
Refseq | XP_020401602.1 | 0.0 | transcription factor TGAL11 | ||||
Swissprot | Q53Q70 | 1e-165 | TGAL4_ORYSJ; Transcription factor TGAL4 | ||||
TrEMBL | K7UBS2 | 0.0 | K7UBS2_MAIZE; Putative bZIP transcription factor superfamily protein | ||||
STRING | GRMZM2G366264_P01 | 0.0 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4444 | 36 | 70 | Representative plant | OGRP6496 | 11 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.2 | 1e-116 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G366264_P01 |
Publications ? help Back to Top | |||
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