PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G361611_P01 | ||||||||
Common Name | bZIP84, LOC100286318, ZEAMMB73_301281 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 162aa MW: 17132.3 Da PI: 6.7749 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37 | 7.5e-12 | 37 | 78 | 5 | 46 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +r++r+ +NRe+ArrsR RK+ ++eL+ ++ L eN + GRMZM2G361611_P01 37 RRAKRMLSNRESARRSRMRKQRHLDELTAQAAHLRRENAHVA 78 89************************************8665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.6E-14 | 33 | 97 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.473 | 35 | 77 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.9E-10 | 36 | 78 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.5E-11 | 37 | 84 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.8E-9 | 37 | 92 | No hit | No description |
CDD | cd14702 | 2.20E-16 | 38 | 86 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 40 | 55 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009744 | Biological Process | response to sucrose | ||||
GO:0080149 | Biological Process | sucrose induced translational repression | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence Send to blast |
MASSSGSGSG SSGFLSAALD LAAAGTEEEL RALMAQRRAK RMLSNRESAR RSRMRKQRHL 60 DELTAQAAHL RRENAHVATA LGLTAQGLLA VDADNAVLRT QAAELAARLG SLNDILACMN 120 TTNAAAAAAF SDPYLAFDGA ATALDDLLRS CPDSMMFEYQ LC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 49 | 56 | RRSRMRKQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Zm.138493 | 0.0 | endosperm| pollen |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G361611 |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Highly expressed in stems and flowers (PubMed:9620274). Expressed in root tips, cotyledons, leaf vasculature, embryos, apical parts of siliques and funiculi (PubMed:9721683). {ECO:0000269|PubMed:9620274, ECO:0000269|PubMed:9721683}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to the DNA sequence 5'-ACTCAT-3' in target gene promoters. Promotes POX1/PRODH1 expression in response to hypoosmolarity stress (PubMed:15047879). Positively regulates the expression of ASN1 and POX2/PRODH2 genes, which are involved in amino acid metabolism (PubMed:18088315). Regulates several metabolic pathways such as myo-inositol, raffinose and trehalose. Regulates several trehalose metabolism genes, including TRE1, TPP5 and TPP6 (PubMed:21534971). Mediates recruitment of the histone acetylation machinery to activate auxin-induced transcription. Interacts with ADA2B adapter protein to promote ADA2B-mediated recruitment of SAGA-like histone acetyltransferase complexes to specific auxin-responsive genes (PubMed:24861440). {ECO:0000269|PubMed:15047879, ECO:0000269|PubMed:18088315, ECO:0000269|PubMed:21534971, ECO:0000269|PubMed:24861440}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00470 | DAP | Transfer from AT4G34590 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G361611_P01 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By light (PubMed:9620274). Induced by hypoosmolarity (PubMed:15047879). Repressed by sucrose (at protein level) (PubMed:9721683, PubMed:15208401). {ECO:0000269|PubMed:15047879, ECO:0000269|PubMed:15208401, ECO:0000269|PubMed:9620274, ECO:0000269|PubMed:9721683}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT068105 | 0.0 | BT068105.2 Zea mays full-length cDNA clone ZM_BFb0053C19 mRNA, complete cds. | |||
GenBank | BT085476 | 0.0 | BT085476.2 Zea mays full-length cDNA clone ZM_BFc0017I11 mRNA, complete cds. | |||
GenBank | BT085551 | 0.0 | BT085551.2 Zea mays full-length cDNA clone ZM_BFc0032D20 mRNA, complete cds. | |||
GenBank | EU976771 | 0.0 | EU976771.1 Zea mays clone 989630 ocs element-binding factor 1 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001152677.1 | 1e-110 | uncharacterized protein LOC100286318 | ||||
Swissprot | O65683 | 4e-30 | BZP11_ARATH; bZIP transcription factor 11 | ||||
TrEMBL | B6UHQ6 | 1e-109 | B6UHQ6_MAIZE; BZIP transcription factor | ||||
STRING | GRMZM2G361611_P01 | 1e-109 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4459 | 33 | 67 | Representative plant | OGRP551 | 16 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34590.1 | 5e-26 | G-box binding factor 6 |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G361611_P01 |
Entrez Gene | 100286318 |