PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G360523_P01
Common NameZEAMMB73_040041
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ARR-B
Protein Properties Length: 671aa    MW: 73467.8 Da    PI: 7.5655
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G360523_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.62.5e-27192245155
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        k+r++W  eLH++Fv+av+q+ G+++A+Pk+ile+m+v+gLt+e+v+SHLQkYR+
  GRMZM2G360523_P01 192 KQRVQWCGELHQKFVQAVRQI-GIDRAVPKKILEIMDVEGLTRENVASHLQKYRI 245
                        79*******************.********************************7 PP
2Response_reg70.85.6e-24121211108
                        EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH....ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS
       Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd....pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 
                        vl vdD+++ +++l++ l+  +y ++++++d++ al++l+e++    +Dl++ D+ m +mdG++ll+ i  e  +lp+i+++a++e +++ +
  GRMZM2G360523_P01  12 VLAVDDDRVCLKILERQLKCCNY-NTTVVTDAQTALDMLRERKdgnqFDLVISDVVMTKMDGFKLLELIGLEM-DLPVIMLSANSETQTIMK 101
                        799********************.***************99888999**********************6644.8***************** PP

                        HHHTTESEEEESS--HHHHH CS
       Response_reg  89 alkaGakdflsKpfdpeelv 108
                         +k Ga d+ +Kp+  e+l+
  GRMZM2G360523_P01 102 GIKHGACDYMVKPVRLEQLR 121
                        *****************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521726.4E-329131IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23003.8E-379135No hitNo description
SMARTSM004484.3E-2710124IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011039.84611128IPR001789Signal transduction response regulator, receiver domain
PfamPF000722.4E-2112121IPR001789Signal transduction response regulator, receiver domain
CDDcd001566.01E-2513121No hitNo description
Gene3DG3DSA:1.10.10.603.6E-28189250IPR009057Homeodomain-like
PROSITE profilePS5129410.931189248IPR017930Myb domain
SuperFamilySSF466892.51E-18190249IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-24192245IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 671 aa     Download sequence    Send to blast
MDADTFPVGL RVLAVDDDRV CLKILERQLK CCNYNTTVVT DAQTALDMLR ERKDGNQFDL  60
VISDVVMTKM DGFKLLELIG LEMDLPVIML SANSETQTIM KGIKHGACDY MVKPVRLEQL  120
RGIWTHVVKN SKIDPRNNIG SDSDDVVQKL PSGDGDKGEK VGETRQKKYP KKNKKTVDVA  180
DEDNEKTSAQ KKQRVQWCGE LHQKFVQAVR QIGIDRAVPK KILEIMDVEG LTRENVASHL  240
QKYRIYLRKL GDGTLRSSSP FADETEAFRR NMNVPSFISS SSSSNHFAKM NSSSLIGTET  300
LLPTESVYIM SPQKNLGISR SNMEPVSHGV NLPKDVIPMP VQDISRFISS GKSYAPVWSD  360
GLLGRSQCFP SGPSGSSFAN ISNSVVLNAS KPFSVDISGR SLANGSNDRP PLTSNMCFSS  420
SHSCSSYASI LGGKILGSSR RIPFEDIADG EMLAPGNLPL QSPQLVKQPS SAGLFNEVAR  480
DVHQFAGLSN SWKVAVPPRF SDLGHNVGTS EGHSQGNIFK INRLSRLARS SAQIPTFRNE  540
YQKKTTGIMG KAVPVVGFRE QVAPFSFENN TRSTVTLIGN SALSSSSSTR PGLNINNSAM  600
LTQVLNGGGA NDNLHGVSTV NQQAVNDQVN NEFFMGTNEA HNAESDDLDD FLAYLVNQDF  660
INNGDSFIDR D
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A3e-21188250163ARR10-B
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G360523
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G360523_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008659835.10.0two-component response regulator ORR25 isoform X2
TrEMBLA0A3L6DGH10.0A0A3L6DGH1_MAIZE; Two-component response regulator ORR25
TrEMBLK7VFP60.0K7VFP6_MAIZE; Putative two-component response regulator family protein
STRINGGRMZM2G360523_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP135042132
Representative plantOGRP1239536
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.13e-83response regulator 12