PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G359589_P01
Common NameZEAMMB73_144799
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family C2H2
Protein Properties Length: 926aa    MW: 96576.7 Da    PI: 7.3042
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G359589_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00024100122123
                        EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                        y C +C+++F r  +L  H+r+H
  GRMZM2G359589_P01 100 YACVNCSMTFGRETTLCGHMRSH 122
                        89********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.604.1E-496124IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015710.429100127IPR007087Zinc finger, C2H2
PROSITE patternPS000280102122IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 926 aa     Download sequence    Send to blast
MHDEEDGGPI GASDVEAIAL SRGSPRATRH GHSRSGCCLE GKASSYGETK MPVGCPGSDE  60
VTTTKQCGLP PRCSREVGRL FRDNRLVGLD TDAPVNDRPY ACVNCSMTFG RETTLCGHMR  120
SHMRDHLSSG SESEEDTPPT PKRRRKKRKS KQLTPLVTTW GNTERRNGSP RHATTREEQP  180
PPDRSQQVAQ IHQDLMATQL GVTDDAVVVV SHAENLEVKV SGSESNMVVP NIGVTMHGSN  240
EVTENSRSNQ HDNSVIIIID DDNDDDANPV ITVAGSPGAP GLAPDAAAAV ATAPALAVAM  300
VATPTVPAAP HVAASMTIQG APASDHRPVK GNNGGFGEGA RYGYGGGNSL TAGAGYDTVV  360
DNGKAIAGYS NNACYGGRRV SSYSGRGYGE GLDGSSIGSH NYSTFTTPAG GESKEAAACG  420
KVYGCPDPEC KNSNTRRHSR IMEKKDKAKL VLHSGRTGTH KCKVAAADDP FKTIEATGIN  480
GIGGAVDDPY NLRGWRFPAG SRSTVLPRLA TRPPAQQPPQ GTVAMAAANN PVTGRHFSAG  540
SNTFTGWSLP PTTSSILPAV PLHNQEQNLL EQIAAAGHRS INPALFSFSR RQEENPLLEG  600
IAVVPSNAIA SSSSTPRPGV AAATHQPSEA IGINSYFPSI VDAPANTMGR RLPFFLAGTG  660
AGRSDIHALP VCRPVRHPAQ VMATGGDPLT GHFPAAISAT GWSLPATTSS GLPAFPLQNP  720
PEQIAAVVPS NAIGRSSSTR RPGVPATTEP SEAIAGIINS NVAAIDALTN TMRGLPFFLA  780
GRSAIHAPPV SRMAHRPSQG MGAMVGNPVT GHFPPSMAAN GWPFPATTSS SILPAIPPQN  840
QEHRPPQGRL VVPANGEHPS TLLFGSNTFP TLPSQNQAEN PPAEETVPGN NGGRAILLFG  900
INIAEGDTNF YIAEALCALE AFAATD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140147PKRRRKKR
2140148PKRRRKKRK
3142147RRRKKR
4142148RRRKKRK
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G359589
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G359589_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021317664.11e-135uncharacterized protein LOC110435890
TrEMBLA0A1D6PSI40.0A0A1D6PSI4_MAIZE; Uncharacterized protein
STRINGGRMZM2G359589_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1867479
Representative plantOGRP1978122