PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G333083_P01
Common NameZEAMMB73_978893
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family G2-like
Protein Properties Length: 521aa    MW: 56361.4 Da    PI: 6.975
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G333083_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.72e-31118171255
            G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v g+t++hvkSHLQ+YR+
  GRMZM2G333083_P01 118 PRLRWTPDLHMAFVHAVERLGGQERATPKLVLQTMNVRGITIAHVKSHLQMYRS 171
                        8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.3E-29114172IPR009057Homeodomain-like
PROSITE profilePS5129411.57114174IPR017930Myb domain
SuperFamilySSF466894.48E-14117172IPR009057Homeodomain-like
TIGRFAMsTIGR015579.8E-23118173IPR006447Myb domain, plants
PfamPF002492.6E-7119170IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    Send to blast
MAKVKQKVAT EDILEGDDER TSSENNSVPP VILDLNEGFG EGNEAGEASD DGDDNQEEDG  60
DDGGSTSEVA GGRNSSNNSS TNHTSMSNKD YDMNSSSNGE GREERELAVR QYNRSKLPRL  120
RWTPDLHMAF VHAVERLGGQ ERATPKLVLQ TMNVRGITIA HVKSHLQMYR SKKLDQESVF  180
SPMDFHMMRT GDHHRYHDMF LHRPAAGSAI SSRLLHGGEF FGSRNAAVSP EARRLYELLQ  240
RRQPTMQTFD FKGYSSGSGL RDQEWSFSQH AAAAAARAGA INGHGPTKGL IHDMGLRKNS  300
RPMSHLFDVR DRDAIASNRT SSDATGAASH GVTITRSADR NGTSSSWPQP RTMSAAASTA  360
PALGSHHLLS MGRGSANLTS SSDHPVVTNE ALGSRLQLQT FQELNKVTGD MCAGTRKTKR  420
MKTPMEGNSG TPDLHLSLSP NDDDMGGAAD KQIKKMKIQG IGLSEQQEVD GDKMLPLSLS  480
LSLRGGEDAR RLEAATGGSS GNKAALGRCT LDLTMSIKAT E
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A6e-18119173357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B6e-18119173357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C6e-18119173357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D6e-18119173357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G333083
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G333083_P01
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9478761e-106EU947876.1 Zea mays clone 364558 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008659607.10.0uncharacterized protein LOC103638481 isoform X1
RefseqXP_020399955.10.0uncharacterized protein LOC103638481 isoform X1
TrEMBLA0A1D6P1350.0A0A1D6P135_MAIZE; Putative MYB DNA-binding domain superfamily protein
STRINGGRMZM2G333083_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27543686
Representative plantOGRP28515123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.15e-32G2-like family protein