PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G328197_P01
Common NameEREB135
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 315aa    MW: 33154.7 Da    PI: 4.4994
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G328197_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.5e-20101152156
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                        ++y+GVr+++ +g+++AeIrdp     +  r +lg+f+taeeAa+ ++ a+++l+g+
  GRMZM2G328197_P01 101 PRYRGVRRRP-WGKYAAEIRDPH----KgERLWLGTFDTAEEAAREYDSAARRLRGP 152
                        68********.**********72....35**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.8E-13101151IPR001471AP2/ERF domain
CDDcd000185.70E-31101160No hitNo description
SuperFamilySSF541715.95E-22102160IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.2E-31102159IPR001471AP2/ERF domain
PROSITE profilePS5103223.933102159IPR001471AP2/ERF domain
SMARTSM003801.5E-36102165IPR001471AP2/ERF domain
PRINTSPR003672.1E-10103114IPR001471AP2/ERF domain
PRINTSPR003672.1E-10125141IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MPEAATVVYT ERKRKIKKEP AETATVPKLV RVFCDDLDAT DSSGDDEAAA SGGVAARGAR  60
KFILEIFTEG HRKGCNATAT IPAPGGGKRK APATTLAPEE PRYRGVRRRP WGKYAAEIRD  120
PHKGERLWLG TFDTAEEAAR EYDSAARRLR GPSATTNFPA PPTPSDRVPA VRELSSAEES  180
DSDETHTVSS PVSVLQEAMP GETAAAVGPP APKPTDDAAD PAAAKKDAPR GDGGLSHFSA  240
DAPLPQLGDD AFSFAPLGGV PFDDLPAPQL DYCYLADDSA LDLGSLPMWP GVDGCQFSDI  300
SDDDLFALSG PGAPN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-2396159872Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11118RKRKIKKE
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G328197
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G328197_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7276770.0KJ727677.1 Zea mays clone pUT5604 AP2-EREBP transcription factor (EREB135) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008650357.10.0pathogenesis-related genes transcriptional activator PTI6
TrEMBLK7VCH10.0K7VCH1_MAIZE; AP2-EREBP transcription factor (Fragment)
STRINGGRMZM2G328197_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP131332332
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.19e-29ERF domain protein 10