PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G313756_P01
Common NamebHLH100, ZEAMMB73_726364
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bHLH
Protein Properties Length: 366aa    MW: 39685.3 Da    PI: 5.4223
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G313756_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.3e-09143223655
                        HHHHHHHHHHHHHHHHHHHCTSCC.C.................................TTS-STCHHHHHHHHHHHHHHH CS
                HLH   6 nerErrRRdriNsafeeLrellPk.as..............................kapskKlsKaeiLekAveYIksLq 55 
                           Er+RR r+++++ eLr+l+P+                                  a++  ++Ka+i   Av Y+k+Lq
  GRMZM2G313756_P01 143 IVSERKRRVRMKEKLYELRSLVPNiTKvrlapvwtsefgrlfagelghsihvvplhaCARHVQMDKASIIADAVVYVKNLQ 223
                        568*********************666******************************99*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-12134167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.04E-8134224No hitNo description
Gene3DG3DSA:4.10.280.101.0E-14134166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.62137222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-7143228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.1E-7143223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-14200241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-12202240IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MDMEEQLLHL EHFMPSSPGF FDVGSGHDPA HFPNGGLFVE QVGATDDGGW VEELMQLGEE  60
LFGGPGDGGI MGDADDHYQQ WQCDDDVDGG SPDGGPPPSV SLDGDDASPG EQGAGELASE  120
PHREDGDDVS GATRKRRDRS KTIVSERKRR VRMKEKLYEL RSLVPNITKV RLAPVWTSEF  180
GRLFAGELGH SIHVVPLHAC ARHVQMDKAS IIADAVVYVK NLQAHARKLK DEVATLEARP  240
RSPTRQDQPQ LQHGRSAGPG RRRQQQQQVE RRDAGSAGAG ARVTHVGAAQ VGDGRFFVTV  300
ECERRDGVAA PLCAAAESLL CFRVESSSIG RSGPDRVVST LTLKVWTGLD WTGSMGWLVT  360
AIDCLI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134149KRRDRSKTIVSERKRR
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G313756
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G313756_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7269720.0KJ726972.1 Zea mays clone pUT3673 bHLH transcription factor (bHLH100) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008663139.10.0transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
TrEMBLK7TNR40.0K7TNR4_MAIZE; BHLH transcription factor (Fragment)
STRINGGRMZM2G313756_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55463057
Representative plantOGRP72711118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.15e-29FER-like regulator of iron uptake