PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G307241_P02
Common NameLOC103654774, ZEAMMB73_636175
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family BES1
Protein Properties Length: 271aa    MW: 28740.2 Da    PI: 8.4388
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G307241_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822134.31.3e-41331733140
             DUF822   3 sgrkptwkErEnn.krRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl...eeaeaagssasasp 90 
                          r+p+w+ErEnn +rRERrRR +a++i+aGLR++Gny+lp + Dnn Vl ALc+eAGw+ve+DGttyr+g kp+   ++++ +g sa   +
  GRMZM2G307241_P02  33 REREPSWRERENNnQRRERRRRVVASRIFAGLRRYGNYALPRHYDNNVVLMALCEEAGWTVEADGTTYRRGGKPPagdQHMADIGGSAAPVT 124
                        579********752799*********************************************************997766666777766433 PP

             DUF822  91 esslq.sslkssalaspvesysaspksssfpspssldsislasaasllpvl 140
                        +   +    ++s  a pv+  +  ++ s+ +s ss+ +  ++s++s  p++
  GRMZM2G307241_P02 125 HQGASdGGGSASGGADPVP--AWLKNLSKQLSDSSYPNYFASSSSSNAPAT 173
                        3332212222233333333..333444444455555444444444444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.2E-3934124IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MEGGVGAGGS RGDEGWARAG DGDGKNGKQG TVREREPSWR ERENNNQRRE RRRRVVASRI  60
FAGLRRYGNY ALPRHYDNNV VLMALCEEAG WTVEADGTTY RRGGKPPAGD QHMADIGGSA  120
APVTHQGASD GGGSASGGAD PVPAWLKNLS KQLSDSSYPN YFASSSSSNA PATPHNGSPS  180
SSPRRLRKMA RYSSPPSTPP PSPARASDML PPWAIRDGGG SRYSFQAFSF HGSGDGEQAG  240
AKEGEVMTDK HADEEGVELT LGNAGTREDH A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A5e-1635110372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B5e-1635110372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C5e-1635110372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D5e-1635110372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.861350.0endosperm
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G307241
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G307241_P02
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0179660.0BT017966.1 Zea mays clone EL01N0523F07.c mRNA sequence.
GenBankEU9412710.0EU941271.1 Zea mays clone 1438280 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020407545.20.0protein BZR1 homolog 3
TrEMBLK7U6L60.0K7U6L6_MAIZE; Protein BRASSINAZOLE-RESISTANT 1
STRINGGRMZM2G307241_P011e-176(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36780.14e-20BES1/BZR1 homolog 2