PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G307241_P01
Common NameZEAMMB73_636175
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family BES1
Protein Properties Length: 436aa    MW: 47979.9 Da    PI: 9.4409
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G307241_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822134.61.1e-41331713138
             DUF822   3 sgrkptwkErEnn.krRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl...eeaeaagssasasp 90 
                          r+p+w+ErEnn +rRERrRR +a++i+aGLR++Gny+lp + Dnn Vl ALc+eAGw+ve+DGttyr+g kp+   ++++ +g sa   +
  GRMZM2G307241_P01  33 REREPSWRERENNnQRRERRRRVVASRIFAGLRRYGNYALPRHYDNNVVLMALCEEAGWTVEADGTTYRRGGKPPagdQHMADIGGSAAPVT 124
                        579********752799*********************************************************997766666777666433 PP

             DUF822  91 esslq.sslkssalaspvesysaspksssfpspssldsislasaasllp 138
                        +   +    ++s  a pv+  +  ++ s+ +s ss+ +  ++s++s  p
  GRMZM2G307241_P01 125 HQGASdGGGSASGGADPVP--AWLKNLSKQLSDSSYPNYFASSSSSNAP 171
                        3322212222233333333..3333444444444444444444444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.0E-3634168IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MEGGVGAGGS RGDEGWARAG DGDGKNGKQG TVREREPSWR ERENNNQRRE RRRRVVASRI  60
FAGLRRYGNY ALPRHYDNNV VLMALCEEAG WTVEADGTTY RRGGKPPAGD QHMADIGGSA  120
APVTHQGASD GGGSASGGAD PVPAWLKNLS KQLSDSSYPN YFASSSSSNA PATPHNGSPS  180
SSPRRLRKMA RYSSPPSTPP PSPARASDML PPWAIRDGGG SRYSFQAFSF HGSGDGEQAG  240
AKEGEGKGGG EGATPRGRGC SHICRGASHE EEVSSIDDGV QDHEKVQADD ETIEAPAFRR  300
RGTRKGHFVL PLSEPAQSDA RRRYRVEPEA QEHADQVLEK NVKKVVNVYM KRRGYSINNF  360
RQYSDVYLNV DQYIEIQESY RQEIVRKYSM FIGVIDSTEL RSRGLLLRCR QVMVAVVSRG  420
LRAWEESMRE QQERFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-1535110372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-1535110372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-1535110372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-1535110372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.861351e-171endosperm
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G307241
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G307241_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0179661e-168BT017966.1 Zea mays clone EL01N0523F07.c mRNA sequence.
GenBankEU9412711e-168EU941271.1 Zea mays clone 1438280 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020407545.21e-176protein BZR1 homolog 3
TrEMBLA0A2D0Z8S90.0A0A2D0Z8S9_MAIZE; BES1/BZR family protein BES1/BZR3
STRINGGRMZM2G307241_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2780224
Representative plantOGRP1370724
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.32e-19BES1 family protein