PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G304573_P01
Common NameLOC103636034, ZEAMMB73_514125
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 298aa    MW: 30992.1 Da    PI: 9.4966
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G304573_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.31.5e-28133192159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        ++Dg++WrKYGqK+ kg++ pr+YYrCt + +Cpv+kkv+r+a+d+ v+++tY g H h+
  GRMZM2G304573_P01 133 VNDGCQWRKYGQKVAKGNPWPRAYYRCTATpDCPVRKKVQRCAHDTAVLVTTYDGVHSHP 192
                        58**************************999****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.7E-29119192IPR003657WRKY domain
SuperFamilySSF1182901.44E-25125193IPR003657WRKY domain
PROSITE profilePS5081126.326128194IPR003657WRKY domain
SMARTSM007741.1E-33133193IPR003657WRKY domain
PfamPF031068.0E-24134192IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MELKTTLVFK DEMMRGAGAA HKMNLGDDEP AAGPVLSLSL GPAANANRAS FRAEGRRGEI  60
SASNDADDGT GLALGLRCGG GSGAKRQRVV IVDNDDGGSS EKALRRLPGA PPPPPQQRPD  120
RVTVRTRCSA ATVNDGCQWR KYGQKVAKGN PWPRAYYRCT ATPDCPVRKK VQRCAHDTAV  180
LVTTYDGVHS HPLTPYAAAA AAARRASCDG APPRLAFPLA ALPQRYCSPS GAVAISGLPA  240
AASSHGHGNV VPMASIMQKA VADPNFRAAV MAAVASYVSE QCGGRNIDDG AFTLPPPG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-24121195275WRKY transcription factor 1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G304573
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G304573_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008656617.10.0probable WRKY transcription factor 72
TrEMBLK7V6U30.0K7V6U3_MAIZE; Putative WRKY DNA-binding domain superfamily protein
STRINGGRMZM2G304573_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143192226
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.15e-37WRKY DNA-binding protein 9