PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G157177_P01
Common NameLOC100216655
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 381aa    MW: 40910.2 Da    PI: 9.847
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G157177_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_157.52.9e-18298353257
                        XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                        +elkr++rkq+NRe+ArrsR+RK+ae ee +++++ L++eN++Lk+el++l+++++
  GRMZM2G157177_P01 298 RELKRQKRKQSNRESARRSRLRKQAEWEEVANRADLLKQENSSLKEELKQLQEKCD 353
                        89***************************************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.7E-261100IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.7E-17139265No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-15292355No hitNo description
SMARTSM003387.6E-20297361IPR004827Basic-leucine zipper domain
PfamPF001701.8E-17298359IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.495299362IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.25E-9300356No hitNo description
CDDcd147021.05E-21302353No hitNo description
PROSITE patternPS000360304319IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0020127anatomyprimary root
PO:0007106developmental stageLP.03 three leaves visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MGKGDVATRS KSQKSPAIQN EQSTPANPPT AYPDWSQFQA YYNAAGTAPV TPPFFHPSVA  60
PSHQGHPYMW GPQMMSPYGT PPPYAAMYAQ GTPYQQAPMP PGSHPYSPYP MQLPNGTVQT  120
PTSGAGGTAT DKSNKNKRKA SLKRSKGSLG SLDVVAVKNN KSPAKPSTSS SNEGSSQSES  180
GSGSSSEGSS TNSKSGSRVK DNSEQGQGND ARSKCTQSSV VEPTQPSSGS VVLNPMMPFW  240
PVPPPMAGPA TTLNMGVDYW GTPASVPMHG KVIAAPTSAP SSNSRDIVLS DPTIQDGREL  300
KRQKRKQSNR ESARRSRLRK QAEWEEVANR ADLLKQENSS LKEELKQLQE KCDGLTSENT  360
SLHEKLKALE DEKSNGNWYK D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1313319RRSRLRK
2313320RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.275500.0cell culture| cell lignification| endosperm| meristem| ovary| pericarp| pollen| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G157177
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G157177_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0665280.0BT066528.1 Zea mays full-length cDNA clone ZM_BFb0014J02 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001346403.10.0uncharacterized protein LOC100216655
RefseqXP_008664944.10.0uncharacterized protein LOC100216655 isoform X1
SwissprotQ501B22e-82BZP16_ARATH; bZIP transcription factor 16
TrEMBLC0PE090.0C0PE09_MAIZE; BZIP transcription factor 16
TrEMBLK4JC670.0K4JC67_MAIZE; BZIP-type transcription factor (Fragment)
STRINGGRMZM2G157177_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115063238
Representative plantOGRP7001767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.13e-61basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]