PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G152172_P01
Common NameLOC100381940
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family BES1
Protein Properties Length: 378aa    MW: 38904.5 Da    PI: 7.5381
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G152172_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822161.36.2e-502399278
             DUF822  2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskplee 78
                       g+ r ptw+ErEnn+rRERrRRaia+ki++GLRa+Gny+l+ ++Dnn+VlkALc+eAGw+ve+DGttyrkg+kp+ +
  GRMZM2G152172_P01 23 GTPRVPTWRERENNRRRERRRRAIASKIFTGLRAHGNYALRRHCDNNDVLKALCEEAGWTVEPDGTTYRKGCKPPGS 99
                       6789**********************************************************************943 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056878.2E-4824119IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000037anatomyshoot apex
PO:0006340anatomyadult vascular leaf
PO:0009025anatomyvascular leaf
PO:0020040anatomyleaf base
PO:0020104anatomyleaf sheath
PO:0020142anatomystem internode
PO:0020148anatomyshoot apical meristem
PO:0001052developmental stagevascular leaf expansion stage
PO:0001083developmental stageinflorescence development stage
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007123developmental stageLP.06 six leaves visible stage
PO:0021004developmental stageinflorescence initiation stage
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MNGGEGEGGG AGSGAAAGGA GAGTPRVPTW RERENNRRRE RRRRAIASKI FTGLRAHGNY  60
ALRRHCDNND VLKALCEEAG WTVEPDGTTY RKGCKPPGSR DPYTAAFIPG GMVSCPVSPR  120
AYNGLSYPSS PSHVGGRGSS FFYGGAGSSR GVVIGGGVGG LPWLNNLSRY SDDASYADDY  180
SFSAPVTPQN GSPPRRKMAR WASGNAAAGS NVQSPWAASP GPSRYASLPV TMPHTPVHGE  240
AVAADPVSLL TGLQISAAAA NKPPAYSMFD FDAGSYSSRP GQSSDGAAWA AASSRGAAGD  300
GDAQVAPHGF SFGWSGGPAF SAWEGEKASV AFNAWEGEKA SGAFSAWEGE KVSDEYVDEG  360
DLELTLGNSR AGAGADRA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-212696372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-212696372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-212696372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-212696372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G152172
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G152172_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0626680.0BT062668.1 Zea mays full-length cDNA clone ZM_BFb0330H18 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001168185.10.0uncharacterized protein LOC100381940
TrEMBLC0P2Z90.0C0P2Z9_MAIZE; BES1/BZR family protein BES1/BZR9
STRINGGRMZM2G152172_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5789722
Representative plantOGRP1954222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36780.12e-24BES1/BZR1 homolog 2