PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G151811_P01
Common NameEIL6, LOC103633580, Zm.20564
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family EIL
Protein Properties Length: 586aa    MW: 63321.1 Da    PI: 5.5093
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G151811_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3438.75.3e-134694571354
                        XXXXXXXXXXXXXXXXXXXXXXX..XXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
               EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa..tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 
                        eel++rmw+d+++l+rlke+++q+      +  ++ +++++s+eqarrkkmsraQDgiLkYMlk+mevcnaqGfvYgiipe+gkpv+gasd+
  GRMZM2G151811_P01  69 EELERRMWRDRVRLRRLKEQQQQSGRPSGGKheASRSRQRQSQEQARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPENGKPVTGASDN 160
                        8**********************88665555336666778**************************************************** PP

                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.......XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--H CS
               EIN3  91 LraWWkekvefdrngpaaiskyqaknlilsgessl...qtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkel 179
                        LraWWkekv+fdrngpaa +kyqa+ ++++g+  +    ++++ + hsl+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP     
  GRMZM2G151811_P01 161 LRAWWKEKVRFDRNGPAAAAKYQADTAAAGGGAADgcgGADAEGQHHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPL---- 248
                        ****************************9998765335679999****************************************9993.... PP

                        HHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.XXXXX CS
               EIN3 180 wwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.slrkq 270
                            ++++ d g+ppykkphdlkkawkv+vLtavikhmsp++++ r+l+rqsk+lqdkm+a+e  a+l+vl+qee+++ ++++  +   ++ 
  GRMZM2G151811_P01 249 ----AAVPGDLGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKARRLVRQSKCLQDKMTAREIVAWLAVLRQEEELYIQLHPGARpAPSSA 336
                        ....24799***************************************************************************66333345 PP

                        XXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX.................................XXXXXXXXXXXXX..XXXXXXXX.... CS
               EIN3 271 spkvtlsceqkedvegkkeskikhvqavktta.................................gfpvvrkrkkkps..esakvssk..ev 325
                        +   ++ ++ ++dv+g++++  ++  + + +a                                 ++ + +kr ++ +  e++ +     + 
  GRMZM2G151811_P01 337 AMFPFCASSGEYDVDGEDDTGRNQQPTSNPAAaafldlsssfmddaghnkfvvaepappikqeaaDAVFFQKRSAPAAavEPELMLGGsfRR 428
                        55667788889****9999996655555555599******************************9999999999776511444443323477 PP

                        ....XXXXXXX.XXXXXXXXXXXXXXXXX CS
               EIN3 326 srtcqssqfrgsetelifadknsisqney 354
                         +tc + q+ +s+++++f d+n ++ ++y
  GRMZM2G151811_P01 429 AYTCGNVQCSHSSSAHGFLDRNTRNAHQY 457
                        8**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.1E-11769319No hitNo description
Gene3DG3DSA:1.10.3180.104.3E-59204327IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.14E-50206323IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    Send to blast
MGGGGTLMLD QRLAADDKVL FGFPAGECFF GEGDLANPAP ATEEMTMSFL PLDADEMMMS  60
DDDDVDGVEE LERRMWRDRV RLRRLKEQQQ QSGRPSGGKH EASRSRQRQS QEQARRKKMS  120
RAQDGILKYM LKMMEVCNAQ GFVYGIIPEN GKPVTGASDN LRAWWKEKVR FDRNGPAAAA  180
KYQADTAAAG GGAADGCGGA DAEGQHHSLH ELQDTTLGSL LSALMQHCDP PQRRFPLEKG  240
VPPPWWPLAA VPGDLGPPPY KKPHDLKKAW KVAVLTAVIK HMSPDVDKAR RLVRQSKCLQ  300
DKMTAREIVA WLAVLRQEEE LYIQLHPGAR PAPSSAAMFP FCASSGEYDV DGEDDTGRNQ  360
QPTSNPAAAA FLDLSSSFMD DAGHNKFVVA EPAPPIKQEA ADAVFFQKRS APAAAVEPEL  420
MLGGSFRRAY TCGNVQCSHS SSAHGFLDRN TRNAHQYSCM FNNSVGQTAA LGGLDLDLPL  480
DGQRSLGELM DMYEANVGNV DTAAPGPEVQ LPGPFPTPCR FGDIISNVIQ QSAAAAVYVR  540
DDDAQFGGDI AAASPGLRFG SGLDVAGGGG LQQPHKSTGS NGSWFY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A6e-592073274132Protein ETHYLENE INSENSITIVE 3
4zds_B6e-592073274132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.205640.0meristem| tassel
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G151811
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots (PubMed:19798512). Expressed at low levels in panicles (PubMed:19798512). Expressed in roots, leaf blades, leaf sheaths, stems, anthers of young flowers, shells, and developing grains (PubMed:25995326). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:25995326}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512, PubMed:25995326). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Required for ethylene-promoted coleoptile elongation (PubMed:25995326). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:25995326}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G151811_P01
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding and metyhl jasmonate. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7280140.0KJ728014.1 Zea mays clone pUT6150 EIL transcription factor (EIL6) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008653495.10.0protein ETHYLENE INSENSITIVE 3
SwissprotQ8W3L90.0EIL2_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 2
TrEMBLA0A060D2G20.0A0A060D2G2_MAIZE; EIL transcription factor (Fragment)
STRINGGRMZM2G151811_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Representative plantOGRP5631682
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.11e-100EIL family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]
  3. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]