PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G151444_P01
Common NameLOC100194371, WRKY45
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 293aa    MW: 31182.8 Da    PI: 9.8283
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G151444_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.93.8e-32215273159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+
  GRMZM2G151444_P01 215 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHS 273
                        59********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-33200273IPR003657WRKY domain
SuperFamilySSF1182901.83E-28207274IPR003657WRKY domain
PROSITE profilePS5081129.356210275IPR003657WRKY domain
SMARTSM007749.8E-37215274IPR003657WRKY domain
PfamPF031065.2E-25216272IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1901141Biological Processregulation of lignin biosynthetic process
GO:1904369Biological Processpositive regulation of sclerenchyma cell differentiation
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MFPSPGRAVM ALGHGGQHMT ASSTAGGMAA SSSSTPTITF AFQQPSPPPP PTATSSLALA  60
HPHHHGVLGY GSACLLLDHH HPTTATSSAS PSHAAPSSVV PAPTLHHHFH GHAAGAPHVS  120
LSPPTRASPP PHHPWSTAAA CEEEPEPHHD HRQQAGQGGR PPRGKGAAVS EGSAAALGVG  180
AVRMKKAGGG GGGKARRKVR EPRFCFKTMS DVDVLDDGYK WRKYGQKVVK NTQHPRSYYR  240
CTQDNCRVKK RVERLAEDPR MVITTYEGRH VHSPSRDEDD DAARANAEMS FIW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-25206272874Probable WRKY transcription factor 4
2lex_A3e-25206272874Probable WRKY transcription factor 4
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.1371160.0ear| meristem
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G151444
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G151444_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0369000.0BT036900.1 Zea mays full-length cDNA clone ZM_BFb0146L21 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001132878.10.0uncharacterized protein LOC100194371
TrEMBLB4FIG20.0B4FIG2_MAIZE; Putative WRKY transcription factor 13
STRINGGRMZM2G151444_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP113838130
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.13e-47WRKY DNA-binding protein 13