PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G144480_P01 | ||||||||
Common Name | ZEAMMB73_391442 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 172aa MW: 19293.5 Da PI: 10.1567 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.9 | 1.6e-11 | 92 | 147 | 5 | 60 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +r rr+ +NRe+ArrsR RK+ ++ eL v L + N++L + l++ +a + GRMZM2G144480_P01 92 RRRRRMVSNRESARRSRVRKQRQLSELWAQVSHLRGANRRLLDDLNRALRSCADAR 147 799****************************************9999877777655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.7E-9 | 87 | 152 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.094 | 90 | 153 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.3E-9 | 91 | 145 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.7E-9 | 92 | 165 | No hit | No description |
SuperFamily | SSF57959 | 5.06E-10 | 92 | 140 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 95 | 110 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 4.79E-13 | 97 | 144 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence Send to blast |
MYHHHFHGEV DSLRFLSPPT TASFAAAHHQ HMNMPLPPPA YYLAIDGDAA CFDELDTIVR 60 EAAAHLGGNS NNESPSLSGS GSDSAAAADQ ERRRRRMVSN RESARRSRVR KQRQLSELWA 120 QVSHLRGANR RLLDDLNRAL RSCADARREN ARLRDEKAQL ANRLHQLLII AG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 104 | 110 | RRSRVRK |
2 | 104 | 111 | RRSRVRKQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Zm.49800 | 1e-87 | shoot |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G144480 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G144480_P01 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU976632 | 3e-85 | EU976632.1 Zea mays clone 985663 bZIP protein mRNA, complete cds. | |||
GenBank | KJ727510 | 3e-85 | KJ727510.1 Zea mays clone pUT5369 bZIP transcription factor (bZIP126) gene, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008679514.1 | 1e-122 | basic leucine zipper 43 | ||||
TrEMBL | A0A1D6QK71 | 6e-95 | A0A1D6QK71_MAIZE; Putative bZIP transcription factor superfamily protein | ||||
STRING | GRMZM2G144480_P01 | 1e-122 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 | Representative plant | OGRP13025 | 4 | 5 |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G144480_P01 |
Entrez Gene | 103654461 |