PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G139160_P01
Common Namemrpi1, mrpi-1, ZEAMMB73_934659
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family C2H2
Protein Properties Length: 501aa    MW: 51835.8 Da    PI: 9.6725
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G139160_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.6e-05254276223
                        EETTTTEEESSHHHHHHHHHH.T CS
            zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                        +C+ Cg+ Fs ++ L+ H  + H
  GRMZM2G139160_P01 254 SCHRCGEQFSKWEALEEHHLSrH 276
                        7*****************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.85253281IPR007087Zinc finger, C2H2
PROSITE patternPS000280255276IPR007087Zinc finger, C2H2
SuperFamilySSF563994.41E-23278500No hitNo description
Gene3DG3DSA:3.90.228.107.6E-13302476IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
MGERRRRAST ASLGGGGGAG GSGAVPARNE EDKAAEPPPP TLWFALKRSL HCRSELSEVH  60
VPRANKASGP VVASGGHLSS IVTKRASARS GCSRSIANLR DVIHGSKRHP GQPPSCSPRS  120
IGSSEFLNPI AHEVVLSTNS RCELKITGFG GCGGLAAVGT GAAAAHDACG GGDGGVVSSF  180
VGTLRPGTPG PAWAGAGHGL PCSGSVRGGV RCTPPRSPCV LLERNGSVVS GHRASSCEET  240
AKDGGAGKGS GGLSCHRCGE QFSKWEALEE HHLSRHAVTE LVEGDSSRKI VEIICRTSLL  300
KSESSCVRIE RVFKVHNTQR TLSRFEEYRE AVKLRASKLP KKHPRCLADG NELLRFHGTT  360
LSCALGGGGG GGGGSSRLCA SDKCAVCRII RHGFSGRKEG KTGVGVFTTS TSGRAFESIE  420
AAGADGAGAG SVSGTTRRAL LVCRVIAGRV HKPLDNLKEF AGQTMGFDSL AGKVGPYSNI  480
EELYLLNPRA LLPCFVVICK P
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.33850.0embryo| root
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G139160
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G139160_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFM2521250.0FM252125.1 Zea mays mRNA for C2H2 zinc finger protein (mrpi-1 gene), cultivar A69Y.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001146839.10.0uncharacterized LOC100280447
TrEMBLB7VCC00.0B7VCC0_MAIZE; C2H2 zinc finger protein
STRINGGRMZM2G139160_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32772841
Representative plantOGRP6611439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-103C2H2 family protein
Publications ? help Back to Top
  1. Royo J, et al.
    Transcriptional activation of the maize endosperm transfer cell-specific gene BETL1 by ZmMRP-1 is enhanced by two C2H2 zinc finger-containing proteins.
    Planta, 2009. 230(4): p. 807-18
    [PMID:19636587]