PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G137532_P01 | ||||||||
Common Name | bZIP82 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 164aa MW: 18218.7 Da PI: 10.6257 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.7 | 1.4e-09 | 54 | 101 | 3 | 53 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 + +r rr+ +NRe+ArrsR RK+ ++ eL v L + N+ +l+el+ GRMZM2G137532_P01 54 AERRRRRMVSNRESARRSRMRKQRQLTELCAQVVHLRGANR---RRLDELN 101 568999**********************************6...5666654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.6E-9 | 52 | 116 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.3E-6 | 53 | 103 | No hit | No description |
PROSITE profile | PS50217 | 9.071 | 54 | 102 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.9E-7 | 54 | 101 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.56E-8 | 56 | 105 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 59 | 74 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 5.26E-11 | 63 | 105 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence Send to blast |
MIAVPPTPLF HPPPPTFEPP IHEAPAVAAA GNSPAGSGSS TDDAYGGRTA MAEAERRRRR 60 MVSNRESARR SRMRKQRQLT ELCAQVVHLR GANRRRLDEL NRALRGCSDM CCENARLQKE 120 KTDLSTKLER LTQAQNAATP SSSSEPQHDT LTLLLNKFNL IFPF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 68 | 75 | RRSRMRKQ |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G137532 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G137532_P01 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ727709 | 0.0 | KJ727709.1 Zea mays clone pUT5648 bZIP transcription factor (bZIP82) gene, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008670266.1 | 1e-117 | basic leucine zipper 43 | ||||
TrEMBL | A0A060D1N2 | 1e-116 | A0A060D1N2_MAIZE; BZIP transcription factor (Fragment) | ||||
STRING | GRMZM2G137532_P01 | 1e-117 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 | Representative plant | OGRP13120 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13600.1 | 3e-08 | basic leucine-zipper 58 |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G137532_P01 |