PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G137374_P01
Common NameLOC103631513
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bHLH
Protein Properties Length: 290aa    MW: 30713.3 Da    PI: 6.2462
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G137374_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.42.9e-09160204655
                        HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        n + r+RR+ri ++ +eL +l+P a      Kl+ ae+Le+A +++k Lq
  GRMZM2G137374_P01 160 NSAARQRRKRISEKTAELARLIPGA-----NKLNTAEMLEEASRHVKLLQ 204
                        7888********************8.....6****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.173154203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-11155212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.85E-10155207No hitNo description
Gene3DG3DSA:4.10.280.105.2E-9159210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-6160204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.7E-10160209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MALSFHTTTA PLFGHRIPAP DMSFLHDDFH SEVTDALLGF VYDPLDASNA ALDDLLGLPP  60
SDDAAFLAPI DGATEAKWQC GKRQRIGGGN QQVPALAAAP MIDEFVLPLP VPLPLPQPPP  120
PAAPLLPVPV PVPTQVPEPV VFVRGADGNK AGGACQSVQN SAARQRRKRI SEKTAELARL  180
IPGANKLNTA EMLEEASRHV KLLQAQVGML ALMRAAGSSE DDKMPSAITA QERMHALLAC  240
GSVQERLAAE GRCLVPTSLV DAVAKDYAVV KGNPVVRRDL GRFVASLQGQ
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G137374
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G137374_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008650631.10.0uncharacterized protein LOC103631513
TrEMBLA0A1D6JMJ60.0A0A1D6JMJ6_MAIZE; Transcription factor bHLH52
TrEMBLA0A317Y6Z40.0A0A317Y6Z4_MAIZE; Transcription factor bHLH53
STRINGGRMZM2G137374_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62013051
Representative plantOGRP59691219
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.12e-18bHLH family protein