PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G125239_P01
Common NameGBP14, ZEAMMB73_230025, Zm.4922
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family GeBP
Protein Properties Length: 553aa    MW: 59884.2 Da    PI: 9.0382
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G125239_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57331.74.2e-10236321697
             DUF573   6 lwseeDeivlLqGlidfkaktgkspsddidafyefvkks.isfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                         w ++De+ +L +l    +++g  p+ d+  +   v+++ +  + + s++ eK+rrLK+++kk  ++      ++ ske+  ++++ls+ iW
  GRMZM2G125239_P01 236 TWGKDDEMKILEALAAHVKREGELPKTDL--LLASVRDHlVRKNCTYSDIYEKVRRLKERYKKAAST-----GIVPSKEDGLQMYNLSEAIW 320
                        6****************999997776665..6677776515678999****************9999.....55666777789********* PP

             DUF573  97 g 97 
                        g
  GRMZM2G125239_P01 321 G 321
                        8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045048.7E-14236321IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    Send to blast
MARKRRAPSP PPPPQEESSS EESGSEELEE PPRLPELRSP PQAAANNADS SEADTDSDTD  60
AQAFQMRQVP RSLTKHTHPV PQPESDPEEE EGESSESEHE NPVPVVQKKA AAAAVLSKAE  120
QERKRPPSDP APTGKAKKMK AVATPLAKAK KGKAELEKPA PEATPAGNAK KGKAELEKPT  180
FDAIPAGKAK KGKAKEAAPE ATPSGKGKKD GDKLEKSAAL DPSHSDSKSE KPVRPTWGKD  240
DEMKILEALA AHVKREGELP KTDLLLASVR DHLVRKNCTY SDIYEKVRRL KERYKKAAST  300
GIVPSKEDGL QMYNLSEAIW GEKAMEAAAA VTSQKGGAVI KGKKGQANKE KMLENAKSDV  360
TKESAPSTAN QSGDSQKASK KGQARLSEEA TTTASPSKSK KQESHNGELN KDDGNLAKGK  420
KGKTDKGKMD IDMDRLTPKE PVNANQNGGI VIRSKEGEIN DEGTEGDANV QGVHRRFGEL  480
QKLYSNLAVY VEEIETHHPC GETLKRVFEF IADEKAEDLE SKIKKLRVAQ AKAEVRQGNI  540
KKEVLNLMLS LVD
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.49220.0ear| embryo| endosperm| leaf| meristem| ovary| shoot| tassel
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G125239
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G125239_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0425060.0BT042506.1 Zea mays full-length cDNA clone ZM_BFb0309E13 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001352770.10.0uncharacterized protein LOC100274187
TrEMBLB4FZG80.0B4FZG8_MAIZE; GeBP transcription factor
STRINGGRMZM2G125239_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP72892737
Representative plantOGRP1298033