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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
GRMZM2G098813_P02 |
| Common Name | ZEAMMB73_199317, zfl1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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| Family |
LFY |
| Protein Properties |
Length: 315aa MW: 34538.2 Da PI: 9.7313 |
| Description |
LFY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GRMZM2G098813_P02 | genome | MaizeSequence | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FLO_LFY | 464.8 | 5.7e-142 | 1 | 303 | 81 | 386 |
FLO_LFY 81 mkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeae 172
m+++eldd+m++l+ +fr+d+l+Ger+G++aa+raer r+++ r + ++lda+sqe+ls+e+++ gg+ +gea+
GRMZM2G098813_P02 1 MTERELDDMMAALAGLFRWDVLLGERFGLRAALRAERGRVMSLG---ARC----FHAGSTLDAASQEALSDERDAAASG----GGMAEGEAG 81
9****************************************966...333....245678************8865333....222223333 PP
FLO_LFY 173 lvaaeekkseeekkka.skk...kqkrkkkkelkse........ededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYL 252
+++++ ++ kk ++ k++rkk+ + +d de +e++e+s+ ++ erqrehPf+vtepgevar+kknGLDYL
GRMZM2G098813_P02 82 RRMVTTTAGKKGKKGVvGTRkgkKARRKKEL----RplnvlddeNDGDEYGGGSESTESSAGGSGERQREHPFVVTEPGEVARAKKNGLDYL 169
3333322222222221011101122222222....123343322222222223334444555556*************************** PP
FLO_LFY 253 fdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykpl 344
f+LyeqCr fLlqvq+iak G+k+Ptkvtnqvfrya+k+gasyinkPkmrhYvhCYalhcLdeeasnalrra+k rgenvGawrqacy+pl
GRMZM2G098813_P02 170 FHLYEQCRVFLLQVQSIAKLGGHKSPTKVTNQVFRYANKCGASYINKPKMRHYVHCYALHCLDEEASNALRRAYKSRGENVGAWRQACYAPL 261
******************************************************************************************** PP
FLO_LFY 345 vaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerskas 386
v+iaar+g+didavf+ahprL++WYvPt+LrqLCh++r +++
GRMZM2G098813_P02 262 VEIAARHGFDIDAVFAAHPRLAVWYVPTRLRQLCHQARGSHA 303
**************************************9876 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
| GO:0010582 | Biological Process | floral meristem determinacy |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0031490 | Molecular Function | chromatin DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0043621 | Molecular Function | protein self-association |
| Sequence ? help Back to Top |
| Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MTERELDDMM AALAGLFRWD VLLGERFGLR AALRAERGRV MSLGARCFHA GSTLDAASQE 60
ALSDERDAAA SGGGMAEGEA GRRMVTTTAG KKGKKGVVGT RKGKKARRKK ELRPLNVLDD 120
ENDGDEYGGG SESTESSAGG SGERQREHPF VVTEPGEVAR AKKNGLDYLF HLYEQCRVFL 180
LQVQSIAKLG GHKSPTKVTN QVFRYANKCG ASYINKPKMR HYVHCYALHC LDEEASNALR 240
RAYKSRGENV GAWRQACYAP LVEIAARHGF DIDAVFAAHP RLAVWYVPTR LRQLCHQARG 300
SHAHAAAGLP PPPMF
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: In the vegetative phase, expressed in shoot meristems and leaf primordia. In the reproductive phase, present in the meristems of primary and secondary branches at primordial and elongating stages, but later transiently down-regulated from the meristems, when the meristem identity change from inflorescence to spikelet. Subsequent expression recovery when spikelets are differentiated, with an accumulation in floral meristems and in primordia of all floral organs, including lodicules, stamens, carpels and ovules. {ECO:0000269|PubMed:21910771}. |
| Uniprot | TISSUE SPECIFICITY: In very young panicle but not in mature florets, mature leaves, roots or apical meristems. {ECO:0000269|PubMed:9482818}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor (By similarity). Together with APO1, involved in the temporal regulation of meristem size and identity during both vegetative and reproductive developments through interaction with APO1 (PubMed:21910771). Promotes flowering (PubMed:21910771). {ECO:0000250|UniProtKB:Q00958, ECO:0000269|PubMed:21910771}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY179882 | 0.0 | AY179882.1 Zea mays cultivar A632 floricaula/leafy-like 1 (fl1) mRNA, complete cds. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G61850.1 | 1e-97 | floral meristem identity control protein LEAFY (LFY) |
