PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G095078_P02
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 379aa    MW: 39684.8 Da    PI: 6.9122
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G095078_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_175.76.2e-24257319163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+e+krerrkq+NRe+ArrsR+RK++e+eeL++kv+ L++eN+aL+ el++lkk ++ +++e+
  GRMZM2G095078_P02 257 EREIKRERRKQSNRESARRSRLRKQQECEELARKVADLTTENSALRAELDNLKKACQDMEAEN 319
                        89*********************************************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165969.1E-8125234No hitNo description
Gene3DG3DSA:1.20.5.1707.0E-17254316No hitNo description
SMARTSM003382.0E-22257321IPR004827Basic-leucine zipper domain
PfamPF001702.5E-21257319IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.139259322IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.56E-11260315No hitNo description
CDDcd147026.70E-22262313No hitNo description
PROSITE patternPS000360264279IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MASSSDEQSK PPEPPAAAAV VTAAAPPQTH AEWVASLQAY YAAAGHPYAW PAQHLMAAAA  60
AGAHFGTPVP FPVYHPGAAA AYYAHASMAA GVPYPTCEAV PAVALPTVPE GKGKGKGGGA  120
SPEKGSSGAP SGEDASRSDD SGSDESSETR DDDTDHKDSS APKKRKSGNT SAEGEPSQAT  180
VVRYAAVESP YPAKGRSASK LPVSAPGRAA LPSATPNLNI GMDIWNASPA LAVPAVQGEV  240
SPGLALARRD GVTQLDEREI KRERRKQSNR ESARRSRLRK QQECEELARK VADLTTENSA  300
LRAELDNLKK ACQDMEAENS RLLVPSVTTT LGMSIEPPKL QLQLQQHHDE EGQLHKKSSN  360
NSNGNCAGGS HKPEANTTR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1273279RRSRLRK
2273280RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.759100.0ear| embryo| meristem| ovary| pericarp| pollen| tassel
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G095078
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G095078_P02
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX4699230.0JX469923.1 Zea mays subsp. mays clone UT3179 bZIP-type transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001105491.10.0maize Em binding protein-1a
SwissprotP250321e-62EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A1D6HVZ40.0A0A1D6HVZ4_MAIZE; EM binding protein 1-like protein
STRINGGRMZM2G095078_P010.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-31basic region/leucine zipper transcription factor 16