PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GRMZM2G092609_P01

Common Name

bZIP103, LOC100272272

Organism

Zea mays

Taxonomic ID

4577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea

Family

bZIP

Protein Properties

Length: 320aa MW: 34668.7 Da PI: 6.7449

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GRMZM2G092609_P01	genome	MaizeSequence	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.1	1.6e-07	187	236	14	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R + +rsR RK+++i+eLe+ v++L++ +L+ ++++l ++ +l +e+ GRMZM2G092609_P01 187 RRSGQRSRVRKLQYIAELERTVDSLQNIGADLAVRVSSLFQLHNALSMEN 236 67889****************************99999999998888887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14703	7.65E-16	186	230	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.3E-6	187	246	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence Send to blast
MSRSPHLPPR CPPLGPQITR RDDSMFTQSC RFPSGDTFFS EPPCWLDDLL ADSGKAPKLP 60 PLRRACSDSD AILDALSTFE SPICRIEEGN QISGGEADDL LDAGEGGESG SVVEASCVYG 120 PNSPRQKSRL TTSESSMVNA VLENVPSNPL QYLSIDASSG MNGNVANGTA DTCDAFGHPD 180 QDKSFKRRSG QRSRVRKLQY IAELERTVDS LQNIGADLAV RVSSLFQLHN ALSMENKQLR 240 IQISSLQRAK LIKDGQTQAL KNEAERLKRM SARRSRSATA SCYDPGSFSF GADASSVSWQ 300 MPDMARLSLN GGSPRGSYGL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	192	RRSGQRS

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Zm.99102	0.0	meristem\| ovary\| shoot

Expression -- Microarray ? help Back to Top
Source	ID
Expression Atlas	GRMZM2G092609

Cis-element ? help Back to Top
Source	Link
PlantRegMap	GRMZM2G092609_P01

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT038383	0.0	BT038383.1 Zea mays full-length cDNA clone ZM_BFb0229F13 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001140232.1	0.0	uncharacterized protein LOC100272272
TrEMBL	A0A3L6EMJ6	0.0	A0A3L6EMJ6_MAIZE; Basic leucine zipper 6
TrEMBL	B4FMP5	0.0	B4FMP5_MAIZE; BZIP protein
STRING	GRMZM2G092609_P01	0.0	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8137	26	31
Representative plant	OGRP9737	4	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	8e-16	bZIP family protein

Link Out ? help Back to Top
Phytozome	GRMZM2G092609_P01
Entrez Gene	100272272