PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G089244_P01
Common NameMYB67, ZEAMMB73_372877, Zm.67359
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family MYB
Protein Properties Length: 288aa    MW: 31863.7 Da    PI: 8.1243
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G089244_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.9e-171461148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                       +g+WT+eEd++lv ++k +G g+W++ ++  g+ R++k+c++rw +yl
  GRMZM2G089244_P01 14 KGAWTKEEDQRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61
                       79******************************99************97 PP
2Myb_DNA-binding56.65.8e-1867111147
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        rg++T+eEd+l+++ ++++G++ W++Ia +++ gRt++++k++w+++
  GRMZM2G089244_P01  67 RGNFTEEEDDLIIKFHELFGNK-WSLIAGRLP-GRTDNEIKNYWNTH 111
                        89********************.*********.************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-23564IPR009057Homeodomain-like
PROSITE profilePS5129416.041961IPR017930Myb domain
SuperFamilySSF466897.55E-3013108IPR009057Homeodomain-like
SMARTSM007171.2E-131363IPR001005SANT/Myb domain
PfamPF002493.4E-151461IPR001005SANT/Myb domain
CDDcd001676.91E-111661No hitNo description
PROSITE profilePS5129428.21362116IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.5E-2865116IPR009057Homeodomain-like
SMARTSM007179.1E-1866114IPR001005SANT/Myb domain
PfamPF002491.5E-1667111IPR001005SANT/Myb domain
CDDcd001672.23E-1369112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MGRSPCCEQA HTNKGAWTKE EDQRLVAYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY  60
LRPDLKRGNF TEEEDDLIIK FHELFGNKWS LIAGRLPGRT DNEIKNYWNT HIKRKLLARG  120
MDPQTHRPLA SATAGQQHYQ LQEPQKRAAG GGPAGHPHQD HLEVVVISNS PDEAYSRSSD  180
DEPRSATPPR RHLDIDLNLS ISLAAYQPPE ETGIIKQPLV MKQEQETAAG GTNAAAVCLC  240
LNSLGYRPGV ECVCGDGSSS SSSSHSHSHS HQWALNFLQA AAPCYRGQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A4e-29141167108B-MYB
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.673590.0root| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G089244
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expression in flowers increases as the flowers develop. {ECO:0000269|PubMed:1840903}.
UniprotTISSUE SPECIFICITY: Expressed in roots, stems, leaves, seed pods and flowers. {ECO:0000269|PubMed:1840903}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000305}.
Function -- GeneRIF ? help Back to Top
  1. MYB14 is an important transcription factor involved in the regulation of the activity of the BT1 promoter in starch biosynthesis.
    [PMID: 28726249]
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G089244_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0696560.0BT069656.1 Zea mays full-length cDNA clone ZM_BFb0205E08 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020407304.10.0putative MYB DNA-binding domain superfamily protein isoform X1
SwissprotP813939e-91MYB08_ANTMA; Myb-related protein 308
TrEMBLA0A3L6F5430.0A0A3L6F543_MAIZE; Myb-related protein 308
TrEMBLK7UP120.0K7UP12_MAIZE; MYB transcription factor
STRINGGRMZM2G089244_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP11637448
Representative plantOGRP5171784
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.15e-90myb domain protein 4
Publications ? help Back to Top
  1. Jackson D,Culianez-Macia F,Prescott AG,Roberts K,Martin C
    Expression patterns of myb genes from Antirrhinum flowers.
    Plant Cell, 1991. 3(2): p. 115-25
    [PMID:1840903]
  2. Xiao Q, et al.
    ZmMYB14 is an important transcription factor involved in the regulation of the activity of the ZmBT1 promoter in starch biosynthesis in maize.
    FEBS J., 2017. 284(18): p. 3079-3099
    [PMID:28726249]