PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G081892_P01
Common NameEREB118, ZEAMMB73_302406, Zm.94717
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 336aa    MW: 35983.4 Da    PI: 4.747
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G081892_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.39.2e-14119157346
                AP2   3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaa 46 
                        y+GVr +k +g+W+AeIr  +     + kr +lg+f+t  +Aa aa
  GRMZM2G081892_P01 119 YRGVRLRK-WGKWAAEIRNpF-----TgKRQWLGTFDT-AGAASAA 157
                        9*****99.**********55.....45**********.7777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.63E-14118167IPR016177DNA-binding domain
SMARTSM003802.5E-13118182IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.3E-18118169IPR001471AP2/ERF domain
PfamPF008473.1E-8118157IPR001471AP2/ERF domain
PROSITE profilePS5103216.924118176IPR001471AP2/ERF domain
PRINTSPR003678.0E-8119130IPR001471AP2/ERF domain
CDDcd000186.26E-16119150No hitNo description
PRINTSPR003678.0E-8141157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006310anatomytassel floret
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0006341anatomyprimary shoot system
PO:0006354anatomyear floret
PO:0009001anatomyfruit
PO:0009025anatomyvascular leaf
PO:0009054anatomyinflorescence bract
PO:0009066anatomyanther
PO:0009074anatomystyle
PO:0009084anatomypericarp
PO:0009089anatomyendosperm
PO:0020040anatomyleaf base
PO:0020127anatomyprimary root
PO:0020136anatomyear inflorescence
PO:0020142anatomystem internode
PO:0020148anatomyshoot apical meristem
PO:0025287anatomyseedling coleoptile
PO:0001007developmental stagepollen development stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007015developmental stageradicle emergence stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007022developmental stageseed imbibition stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007045developmental stagecoleoptile emergence stage
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007094developmental stageLP.01 one leaf visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007112developmental stage1 main shoot growth stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007123developmental stageLP.06 six leaves visible stage
PO:0007633developmental stageendosperm development stage
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MAPLNHQQHV LLKKALAKKP KAKRMSRFGL KPSAAALLKS RPQQPAPAPA QPRRRVRVLF  60
EDPDATDSDS DDEEAGASTC PAKAKRFSFE TFVGKVPARP VLPAAAVAAC ASGGAPESYR  120
GVRLRKWGKW AAEIRNPFTG KRQWLGTFDT AGAASAAYLS ASRSFADEKR RRRGQPVPSS  180
SPVPSASATP TASSSSSTST APFAHPSPSS VLGPATKEAP LNPQSPELVA TPTLVLPSDE  240
SAELPDDPEF YQDLLRGLQL PDISPMDFRA GLDALDVSDA PFGLDDEQDL LLGDFGDEEL  300
EIDLDLDDIN DVFPEMPGCD LGRGMDDFLQ TVDFCV
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.947170.0cell culture| ear| embryo| endosperm| meristem| ovary| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G081892
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G081892_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7283540.0KJ728354.1 Zea mays clone pUT6636 AP2-EREBP transcription factor (EREB118) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001147717.20.0pathogenesis-related transcriptional activator PTI6
TrEMBLK7UQ190.0K7UQ19_MAIZE; AP2-EREBP transcription factor
STRINGGRMZM2G081892_P020.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129302528
Representative plantOGRP1281645
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.11e-11ERF family protein