PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G080111_P01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 168aa MW: 18767.2 Da PI: 6.5301 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.9 | 9.3e-13 | 77 | 129 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++ rr+++NRe+ArrsR RK+ ++ eL v+eL + N++L el++ + ++a GRMZM2G080111_P01 77 RKKRRLASNRESARRSRVRKQRRLYELSLQVAELLGTNQRLLVELNHVTAKYA 129 5789*******************************************998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.8E-8 | 73 | 130 | No hit | No description |
SMART | SM00338 | 9.5E-12 | 73 | 137 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.266 | 75 | 138 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.1E-9 | 77 | 129 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.27E-9 | 77 | 129 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 80 | 95 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence Send to blast |
MQQNWAADLA CLPGLDLGSL FLPQNDDPMY DFSTFDMVDL DPYPCSCNGS VTTTTVSSVS 60 AAAADKHQER RGNDVERKKR RLASNRESAR RSRVRKQRRL YELSLQVAEL LGTNQRLLVE 120 LNHVTAKYAL LARENAKLRE EAAGLQRRLS EMELMGEAEA AALSPEVA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 89 | 95 | RRSRVRK |
2 | 89 | 96 | RRSRVRKQ |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G080111 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G080111_P01 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008645357.1 | 1e-120 | basic leucine zipper 8 | ||||
TrEMBL | A0A1D6H348 | 1e-119 | A0A1D6H348_MAIZE; Basic leucine-zipper 58 | ||||
TrEMBL | A0A3L6ESZ2 | 1e-119 | A0A3L6ESZ2_MAIZE; Uncharacterized protein | ||||
STRING | GRMZM2G080111_P01 | 1e-120 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12742 | 27 | 35 | Representative plant | OGRP16905 | 3 | 3 |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G080111_P01 |
Entrez Gene | 103626765 |