PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G077124_P02 | ||||||||
Common Name | LOC100191211 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 128aa MW: 13840.5 Da PI: 10.7787 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.9 | 2.5e-09 | 87 | 112 | 5 | 30 |
CHHHCHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeiee 30 +r++r++kNRe+A rsR+RK+a++++ GRMZM2G077124_P02 87 RRQKRMIKNRESAARSRARKQAYTKR 112 79*********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.8E-7 | 81 | 112 | No hit | No description |
SuperFamily | SSF57959 | 3.7E-5 | 87 | 111 | No hit | No description |
Pfam | PF00170 | 4.6E-7 | 87 | 112 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 90 | 105 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 128 aa Download sequence Send to blast |
MGEMTLEDFL SRAGVAVDAA PHWMHQYPQQ QQYALPRPLP LPGPALDAAY HGDRPGVFLS 60 HSQVAGRKRA ATGAVAGDGV VERTVERRQK RMIKNRESAA RSRARKQAYT KRAGEQGGPA 120 GGGEQASH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 66 | 89 | RKRAATGAVAGDGVVERTVERRQK |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Zm.19325 | 0.0 | ear| endosperm| ovary |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G077124 |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}. | |||||
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G077124_P02 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT033247 | 0.0 | BT033247.1 Zea mays full-length cDNA clone ZM_BFb0124H20 mRNA, complete cds. | |||
GenBank | BT035906 | 0.0 | BT035906.1 Zea mays full-length cDNA clone ZM_BFb0087N11 mRNA, complete cds. | |||
GenBank | BT055475 | 0.0 | BT055475.1 Zea mays full-length cDNA clone ZM_BFb0325H08 mRNA, complete cds. | |||
GenBank | KJ728208 | 0.0 | KJ728208.1 Zea mays clone pUT6484 bZIP transcription factor (bZIP92) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001130117.1 | 9e-74 | uncharacterized protein LOC100191211 | ||||
Swissprot | Q9LES3 | 2e-20 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | B4FFL8 | 3e-74 | B4FFL8_MAIZE; Uncharacterized protein | ||||
STRING | GRMZM2G077124_P03 | 3e-73 | (Zea mays) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41070.3 | 8e-18 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G077124_P02 |
Publications ? help Back to Top | |||
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