PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G074645_P01
Common NameHB123, ZEAMMB73_494077, Zm.17496
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family TALE
Protein Properties Length: 549aa    MW: 59386.7 Da    PI: 9.5685
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G074645_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox32.41.6e-103343711954
                        HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
           Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                        Fe   ++yp+ ++++ LAk++gLt +qV++WF N R +
  GRMZM2G074645_P01 334 FEHflHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVR 371
                        554458******************************98 PP
2BELL91.77.4e-30201270372
               BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                        +e q +k++L+sl+e V++rYkqy++qlq vissFe+v gl +a p++s+Al+++S+hF+ Lk +i++q+
  GRMZM2G074645_P01 201 AEQQWRKTRLISLMEDVCRRYKQYYQQLQSVISSFETVSGLSNAVPFASMALRTMSKHFKFLKGMIMSQL 270
                        58899**************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.1E-34138268IPR006563POX domain
PfamPF075268.6E-34143266IPR006563POX domain
PROSITE profilePS5007112.487312375IPR001356Homeobox domain
SMARTSM003892.9E-11315379IPR001356Homeobox domain
CDDcd000863.54E-14315376No hitNo description
SuperFamilySSF466893.89E-17317382IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-28318379IPR009057Homeodomain-like
PfamPF059204.8E-19332371IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010089Biological Processxylem development
GO:0010154Biological Processfruit development
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0048457Biological Processfloral whorl morphogenesis
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0004006anatomymesophyll cell
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0008018anatomytransition vascular leaf
PO:0009025anatomyvascular leaf
PO:0009054anatomyinflorescence bract
PO:0020040anatomyleaf base
PO:0020136anatomyear inflorescence
PO:0025142anatomyleaf tip
PO:0025589anatomyleaf lamina tip
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007003developmental stageIL.03 full inflorescence length reached stage
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    Send to blast
MSSAAGGGYG AGGAEHQHLL LGQAAGAGQL YHVPQHSRRE KLRFPPDDAA DSPPPTAWPA  60
PPPFYSYASS STSSYYSPHS PTLAHAQLVA HALPAGAGVQ IPSQNFALSL SSAPSNPPPA  120
PRRQLAAGVA TGPYGPFTGY AAVLGRSRFL GPAQKLLEEI CNVGGRPPHL DPLSDEGMFG  180
MEHGMGGVDR ATAEAVAVSG AEQQWRKTRL ISLMEDVCRR YKQYYQQLQS VISSFETVSG  240
LSNAVPFASM ALRTMSKHFK FLKGMIMSQL RNTSKVAASD GIGKDDMANF ALMGGGADHL  300
RGNSVNTFSQ AHNIWRPQRG LPERAVSVLR SWLFEHFLHP YPTDSDKQML AKQTGLTRNQ  360
VSNWFINARV RLWKPMVEEI HNLEMRQQLQ KNTSAVDKTQ LGMQQLIQHS SANSRQRGQS  420
SGGTTRNQDE LPPRMPHDMA GQGQQQQQQV SFAYAGLPAH HHGLALSHPQ QQAEAVSAVG  480
GGVSLTLGLH QNNNRTYVAE PLPAALPHRF GLEDVSDAYV MQGTTSFGGQ DRHFGKGMGG  540
HHFVHDLVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A2e-16321379563Homeobox protein Meis2
3k2a_B2e-16321379563Homeobox protein Meis2
4xrs_A2e-16321378158Homeobox protein Meis1
4xrs_B2e-16321378158Homeobox protein Meis1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.174960.0meristem| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G074645
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G074645_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0644780.0BT064478.1 Zea mays full-length cDNA clone ZM_BFc0172N23 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001168681.10.0uncharacterized protein LOC100382470
TrEMBLC0P8590.0C0P859_MAIZE; Uncharacterized protein
STRINGGRMZM2G074645_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25283881
Representative plantOGRP13316172
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.13e-80TALE family protein