PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G069176_P01
Common NameZm.32160
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family C2H2
Protein Properties Length: 248aa    MW: 26017.3 Da    PI: 8.2179
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G069176_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.0004193115123
                        EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                        ++C  Cgk F +   L  H ++H
  GRMZM2G069176_P01  93 FRCAVCGKAFASYQALGGHKSSH 115
                        89**********99999999888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139124.8E-1292117IPR007087Zinc finger, C2H2
SuperFamilySSF576672.92E-893115No hitNo description
PROSITE profilePS5015710.67993120IPR007087Zinc finger, C2H2
SMARTSM003550.1193115IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028095115IPR007087Zinc finger, C2H2
SuperFamilySSF576672.92E-8144171No hitNo description
PfamPF139121.5E-9149172IPR007087Zinc finger, C2H2
SMARTSM003551.2149171IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.829149176IPR007087Zinc finger, C2H2
PROSITE patternPS000280151171IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MAAGFEALLD STALSLALPV PVPTMTLLGL KKLNSEDYLA ICLAALAGTR GRSGLSKAAA  60
AAAGFGRQEG GGSRKQWSCP PPAPAREEEE LRFRCAVCGK AFASYQALGG HKSSHRRPPT  120
GEQYAAALAA AQQAADHSEE TTTTSGGPHR CTICWRGFAT GQALGGHKRC HYWDGSSVSV  180
SLSATASATG TGTGSSGVTV RNFDLNLMPV PESDGMRRWV EEEEEVQSPL PIKKRRISNP  240
SLTLATCD
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G069176
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in abscisic acid (ABA) signaling. Required for the regulation of the cross-talk between NADPH oxidase, hydrogen peroxide and MAP kinase in ABA signaling. Regulates the expression of the NADPH oxidase genes RBOHB and RBOHE, and the MAPK genes MPK1, MPK4, MPK5, MPK7 and MPK14. Regulates ABA-induced hydrogen peroxide production and antioxidant defense. Required for tolerance to water stress and oxidative stress. {ECO:0000269|PubMed:25071223}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G069176_P01
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) and hydrogen peroxide. {ECO:0000269|PubMed:25071223}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020402734.10.0zinc finger protein 36
SwissprotQ75KE52e-69ZFP36_ORYSJ; Zinc finger protein 36
TrEMBLA0A1D6K6460.0A0A1D6K646_MAIZE; Zinc finger protein AZF2
STRINGGRMZM2G069176_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34123273
Representative plantOGRP13115149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04340.16e-27zinc finger of Arabidopsis thaliana 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]
  3. Zhang H, et al.
    A novel rice C2H2-type zinc finger protein, ZFP36, is a key player involved in abscisic acid-induced antioxidant defence and oxidative stress tolerance in rice.
    J. Exp. Bot., 2014. 65(20): p. 5795-809
    [PMID:25071223]
  4. Li W, et al.
    A Natural Allele of a Transcription Factor in Rice Confers Broad-Spectrum Blast Resistance.
    Cell, 2017. 170(1): p. 114-126.e15
    [PMID:28666113]