PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G067921_P01 | ||||||||
Common Name | DLF1, Zm.105296 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 204aa MW: 21508 Da PI: 9.5194 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 58.5 | 1.4e-18 | 133 | 186 | 4 | 57 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++r +r++kNRe+A rsR+RK+a++ eLe+kv+ L++eN++L+ + +el++ v+ GRMZM2G067921_P01 133 DRRKKRMIKNRESAARSRARKQAYVRELETKVQLLQQENESLRVKYDELRESVE 186 799***********************************************9886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-16 | 130 | 194 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.289 | 132 | 186 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.8E-17 | 133 | 186 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.4E-16 | 133 | 187 | No hit | No description |
SuperFamily | SSF57959 | 1.56E-13 | 134 | 187 | No hit | No description |
CDD | cd14707 | 4.99E-21 | 134 | 181 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 137 | 152 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence Send to blast |
MEDDEDIWAN TASSPSASPP QPVAAGSVST CSAFISTQLS LNSRLHLLSS AAAGGGSSPV 60 RGGAYGADGV RHHHMALGGG FRNAAASQGS FFPYNLAGAG ADVAPFDGGR GVLEDDMSVG 120 AAASGTWAGG GTDRRKKRMI KNRESAARSR ARKQAYVREL ETKVQLLQQE NESLRVKYDE 180 LRESVEVAVP MVRKTLQRMP SAPF |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Zm.105296 | 0.0 | meristem| shoot |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G067921 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G067921_P01 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EF093789 | 0.0 | EF093789.1 Zea mays delayed flowering1 (DLF1) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001105962.1 | 1e-146 | uncharacterized protein LOC100037791 | ||||
TrEMBL | A0A3L6E3Q1 | 1e-147 | A0A3L6E3Q1_MAIZE; BZIP transcription factor 27 | ||||
TrEMBL | A1E240 | 1e-147 | A1E240_MAIZE; Delayed flowering1 | ||||
STRING | GRMZM2G067921_P01 | 1e-147 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9764 | 30 | 44 | Representative plant | OGRP14750 | 4 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17770.2 | 2e-19 | basic region/leucine zipper motif 27 |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G067921_P01 |
Publications ? help Back to Top | |||
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