PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G060465_P01
Common NameEREB155, ZEAMMB73_607892
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 253aa    MW: 27045.5 Da    PI: 7.8686
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G060465_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-19100150356
                AP2   3 ykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 
                        ++GVr+++ +g+++AeIrdp   g   kr +lg+f+taeeAa+ ++aa+++++g+
  GRMZM2G060465_P01 100 FRGVRRRP-WGKYAAEIRDP---GiAGKRRWLGTFDTAEEAAAVYDAAALRIRGH 150
                        8*******.**********9...5444**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003804.4E-3499163IPR001471AP2/ERF domain
PROSITE profilePS5103223.22299157IPR001471AP2/ERF domain
PRINTSPR003673.4E-9100111IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.6E-29100158IPR001471AP2/ERF domain
SuperFamilySSF541712.75E-22100158IPR016177DNA-binding domain
CDDcd000182.09E-17100159No hitNo description
PfamPF008472.5E-11100150IPR001471AP2/ERF domain
PRINTSPR003673.4E-9123139IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MPPPNGFLYE FNSRHLLPKT LPKPRAPPIA LHPRDLGMDD ARQHQPRPPH GAGGRVRLSD  60
SDADECHRHL LHQTGHPLPS SAAAPAPKSN RLAPKSNRPF RGVRRRPWGK YAAEIRDPGI  120
AGKRRWLGTF DTAEEAAAVY DAAALRIRGH RAVTNFPSSP AAVAPKPALA AAVRPPPPAP  180
PPAPEAETSS ASTVVDAGAG GDDEVSGVPP WFGDGGPLEL LDFGLPLAAP KRAQWEEEFG  240
DLGDLDQIFD LPL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-21100157663ATERF1
3gcc_A6e-21100157663ATERF1
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G060465
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G060465_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7284940.0KJ728494.1 Zea mays clone pUT6799 AP2-EREBP transcription factor (EREB155) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008680693.11e-150ethylene-responsive transcription factor ERF095
TrEMBLK7U6G71e-178K7U6G7_MAIZE; AP2-EREBP transcription factor (Fragment)
STRINGGRMZM2G060465_P011e-178(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Representative plantOGRP1976322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.19e-17ERF family protein