PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G060290_P01 | ||||||||
Common Name | bZIP70, LOC100279873, ZEAMMB73_785838 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 458aa MW: 49026.6 Da PI: 9.5495 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.6 | 2.8e-13 | 155 | 197 | 5 | 44 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeaeNka 44 k rr+++NReAAr+sR+RKka+i++Le+ + ++Le+e+++ GRMZM2G060290_P01 155 KTLRRLAQNREAARKSRLRKKAYIQQLETgriRLAQLEQEMQM 197 7789***********************9655599999999975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.2E-5 | 151 | 204 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.4E-9 | 151 | 196 | No hit | No description |
PROSITE profile | PS50217 | 8.668 | 153 | 196 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.4E-10 | 155 | 198 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.69E-7 | 155 | 189 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 158 | 173 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 8.7E-24 | 234 | 307 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence Send to blast |
MAYPSTSGMV QASSSLHGSM RRDPEGYDMS SDLDQALLLY FDGQQAKTSV QVQEQQPQTL 60 NIFPSQPMHI GPSPKGSMAS SSAPAAATQV AGPSKNPQAP SSLKVGGGPP PLAAGKSSKA 120 AIKREGSGSG KHHGAAAGAS STADQEAGPR TPDPKTLRRL AQNREAARKS RLRKKAYIQQ 180 LETGRIRLAQ LEQEMQMART HQGALWGAGT LSPDAALFNL EYERWLGEHS KVVARLRAAA 240 EEHRPDVELR AYVDEAAAHY GALMGHKARL AAADPLHLLS GLWKGAAERC FLWIGGFRAS 300 DLVKVVVRHV EPLAEQQAAG ARDVEQAARR TEEALDAELE ALLRSLSEVV SSDVQPPGPG 360 MMYGGGGQLY HPADVAGYMG MGHMHVALAM DKVASLGTIL RQADELRMQA LHALRQILTA 420 RQAARCFVAA DDYFCRLRTL SALWTTSRTA QLARGPAG |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G060290 |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G060290_P01 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT055042 | 0.0 | BT055042.1 Zea mays full-length cDNA clone ZM_BFc0123E11 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001146298.1 | 0.0 | uncharacterized LOC100279873 | ||||
Swissprot | Q69T21 | 1e-172 | TGAL8_ORYSJ; Transcription factor TGAL8 | ||||
TrEMBL | B8A0F0 | 0.0 | B8A0F0_MAIZE; BZIP transcription factor | ||||
STRING | GRMZM2G060290_P01 | 0.0 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12972 | 21 | 26 | Representative plant | OGRP16996 | 3 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 8e-87 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G060290_P01 |
Entrez Gene | 100279873 |
Publications ? help Back to Top | |||
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