PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G040481_P01
Common NameLOC103627330
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family EIL
Protein Properties Length: 429aa    MW: 47557.5 Da    PI: 4.8891
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G040481_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3350.92.6e-107423382285
                        XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX.....................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
               EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksn.....................ksneqarrkkmsraQDgiLkYMlkemevcnaqGf 72 
                        +lk+rmw+dqmll+rl+ r      ++   +g ++s+                      ++ + rrk+m raQDg+L++Mlk+me+cna+Gf
  GRMZM2G040481_P01  42 DLKRRMWRDQMLLNRLECRADVFS-AAGG-AGPSSSRplgpptagahgedeeeeeeveAPEVRCRRKAMLRAQDGVLRHMLKMMEACNARGF 131
                        9******************99866.3333.45555567888888888888999999989999****************************** PP

                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--T CS
               EIN3  73 vYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfpl 164
                        vYg i e g+p+ g+sdsLr+WWk++v+fdr+gp+a++        ++ges     + s  h+l+++qD+tlgS+Lsal+qhc ppqr+fpl
  GRMZM2G040481_P01 132 VYGVINEAGEPMLGSSDSLRGWWKDNVSFDRAGPMALVTA------PTGESPP--GPASCLHRLQDIQDSTLGSVLSALIQHCVPPQRSFPL 215
                        *************************************987......5666665..578999******************************* PP

                        TT--HHHH---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT CS
               EIN3 165 ekgvepPWWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeek 255
                        e+g++pPWWPtGke+wwg++g ++++qg+ppy+kphdlkkawk+s+L++vikhmsp+++++r+l++qsk+lq++msake+ +++++l+qee 
  GRMZM2G040481_P01 216 ERGLAPPWWPTGKEAWWGSQGeVQAHQGAPPYRKPHDLKKAWKISLLSSVIKHMSPRFDQMRKLVWQSKRLQQRMSAKETETWSKILRQEET 307
                        ******************************************************************************************** PP

                        -S--XXXXXX.XXXXXXXXXXXXXXXXXXXX CS
               EIN3 256 ecatvsahss.slrkqspkvtlsceqkedve 285
                        + ++++++ + +  +++ +  ++ +  edv 
  GRMZM2G040481_P01 308 LSRRLKSSLRiTPLDGDDDDDMDRDGLEDVV 338
                        *999999865333334445555544444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.2E-11142306No hitNo description
Gene3DG3DSA:1.10.3180.106.5E-63182315IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.48E-55184308IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MEHDVAHGAG GAVPAGEEAF EVAHQLLAQE EFSDSESIQI SDLKRRMWRD QMLLNRLECR  60
ADVFSAAGGA GPSSSRPLGP PTAGAHGEDE EEEEEVEAPE VRCRRKAMLR AQDGVLRHML  120
KMMEACNARG FVYGVINEAG EPMLGSSDSL RGWWKDNVSF DRAGPMALVT APTGESPPGP  180
ASCLHRLQDI QDSTLGSVLS ALIQHCVPPQ RSFPLERGLA PPWWPTGKEA WWGSQGEVQA  240
HQGAPPYRKP HDLKKAWKIS LLSSVIKHMS PRFDQMRKLV WQSKRLQQRM SAKETETWSK  300
ILRQEETLSR RLKSSLRITP LDGDDDDDMD RDGLEDVVRG VQDKRKRELI SSSSGGRAEL  360
VADENPIDEL LKRHYNLVPD QHGIVVAPEN DAGELDLLYG VVDDVPPDVL FDLIASCSGA  420
DDAFRLILD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-491823121130Protein ETHYLENE INSENSITIVE 3
4zds_B1e-491823121130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G040481
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G040481_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7269670.0KJ726967.1 Zea mays clone pUT3668 EIL transcription factor (EIL5) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008645862.10.0ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9FJQ52e-87EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLA0A1D6HB990.0A0A1D6HB99_MAIZE; ETHYLENE INSENSITIVE 3-like 5 protein
STRINGGRMZM2G040481_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Representative plantOGRP5631682
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.11e-88EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]