PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G038015_P01 | ||||||||
Common Name | bZIP24, LOC103644612 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 176aa MW: 19287.5 Da PI: 10.1916 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.9 | 6.1e-10 | 20 | 64 | 3 | 47 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 e +r r+ +NR++Ar+sR +++ ++ L+ +++ L eN+a++ GRMZM2G038015_P01 20 EERRRNRMTSNRLSARKSRMKRQRHVDDLAAEAERLRRENEAMRA 64 567889************************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.4E-10 | 18 | 82 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 1.7E-6 | 19 | 65 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.944 | 20 | 83 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-8 | 21 | 64 | No hit | No description |
SuperFamily | SSF57959 | 1.13E-7 | 22 | 64 | No hit | No description |
CDD | cd14702 | 1.06E-13 | 23 | 69 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 26 | 40 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence Send to blast |
MVPLAGAQGA RRAAVVITEE ERRRNRMTSN RLSARKSRMK RQRHVDDLAA EAERLRRENE 60 AMRAGVGDAV LRSRALEQEN RVLAAHARQL CAALLLRNSQ LSLLGDVAGV PLDVPGVPDH 120 LVQLYGGVQV PVMPLSPSVM PLSPSPPPPL HLQLPLEIQL MLLQPDVMDA VGMLEL |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G038015 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G038015_P01 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ728266 | 0.0 | KJ728266.1 Zea mays clone pUT6543 bZIP transcription factor (bZIP24) gene, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008666012.1 | 1e-119 | bZIP transcription factor 53 | ||||
TrEMBL | A0A060D2L0 | 1e-118 | A0A060D2L0_MAIZE; BZIP transcription factor (Fragment) | ||||
STRING | GRMZM2G038015_P01 | 1e-118 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12504 | 28 | 37 | Representative plant | OGRP11972 | 4 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G62420.1 | 5e-11 | basic region/leucine zipper motif 53 |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G038015_P01 |
Entrez Gene | 103644612 |