PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G035370_P03
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family G2-like
Protein Properties Length: 278aa    MW: 29869.5 Da    PI: 7.4768
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G035370_P03genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like36.11.4e-11249273125
            G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                        k+r+rWt++LHerFv+ v+qLGG++
  GRMZM2G035370_P03 249 KTRIRWTQDLHERFVDSVNQLGGAD 273
                        68*********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.8E-9248274IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009001anatomyfruit
PO:0009089anatomyendosperm
PO:0020127anatomyprimary root
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007633developmental stageendosperm development stage
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MMDAKKIKLH DYHLYGSQQL FPAAGGLSFH PAAGLMSSLP QPPHAAWLHE DHHTTTPRSV  60
LATHGSLQGS RCVGSDAAAF FAAEELMMGM PRFDDCPLGG TEMTAFAKRP TTEDEQLHYR  120
RPGPVDPLPL RDSAAVRTYY VRPQQRDGAT EAPPSLELPF QQGRRQQQQL FGNASTGRLL  180
GGEPKAHSFT AHVATSTLLP AMEAPAGMQQ SPTENPLSRS CSTIGAPATH VGSGNVAAAA  240
APGHGAPSKT RIRWTQDLHE RFVDSVNQLG GADSERRP
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.210130.0endosperm
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G035370
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G035370_P03
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008668740.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X5
RefseqXP_020403667.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X5
TrEMBLA0A1D6DUN20.0A0A1D6DUN2_MAIZE; Myb family transcription factor PHL5
STRINGGRMZM2G035370_P010.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.23e-09G2-like family protein