PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G035370_P02
Common NameLOC103645799
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family G2-like
Protein Properties Length: 427aa    MW: 46813.8 Da    PI: 7.3456
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G035370_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.82.1e-32252306155
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        k+r+rWt++LHerFv+ v+qLGG++kAtPk il+lm+ +gLt++h+kSHLQkYR+
  GRMZM2G035370_P02 252 KTRIRWTQDLHERFVDSVNQLGGADKATPKGILKLMNSDGLTIYHIKSHLQKYRI 306
                        68****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.649249309IPR017930Myb domain
SuperFamilySSF466892.51E-17250306IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.3E-30251307IPR009057Homeodomain-like
TIGRFAMsTIGR015574.1E-24252307IPR006447Myb domain, plants
PfamPF002498.6E-8256305IPR001005SANT/Myb domain
PfamPF143792.8E-21338384IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MMDAKKIKLH DYHLYGSQQL FPAAGGLSFH PAAGLMSSLP QPPHAAWLHE DHHTTTPRSV  60
LATHGSLQGS RCVGSDAAAF FAAEELMMGM PRFDDCPLGG TEMTAFAKRP TTEDEQLHYR  120
RPGPVDPLPL RDSAAVRTYY VRPQQRDGAT EAPPSLELPF QQGRRQQQQL FGNASTGRLL  180
GGEPKAHSFT AHLLQVATST LLPAMEAPAG MQQSPTENPL SRSCSTIGAP ATHVGSGNVA  240
AAAAPGHGAP SKTRIRWTQD LHERFVDSVN QLGGADKATP KGILKLMNSD GLTIYHIKSH  300
LQKYRIAKYM PASSTSEGKQ EKRAVGNDVQ NLDPSTGMKI TEALRVQLDV QRRLHEQLEI  360
QRNLQLRIEV QGKKLQKMFE EQMKASRTVM EPRQEEEDDD DDAFNDVHVQ LLAAAARSDA  420
GFQLNIS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A3e-22252309158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-22252309158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-22252309158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-22252309158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.210130.0endosperm
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G035370
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G035370_P02
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008668738.10.0uncharacterized protein LOC103645799 isoform X4
RefseqXP_020403666.10.0uncharacterized protein LOC103645799 isoform X4
TrEMBLA0A1D6DUN20.0A0A1D6DUN2_MAIZE; Myb family transcription factor PHL5
STRINGGRMZM2G035370_P010.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.12e-62G2-like family protein